RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CMC4P56277 68 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 SSBP1Q04837 148 aaKnown RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 FANCD2OSQ96PS1 177 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 NAV1Q8NEY1 1877 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 F8W735 103 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 H0Y980 276 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 GATA2P23769 480 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 COX19Q49B96 90 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 RCC1LQ96I51 464 aaKnown RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 ASCL2Q99929 193 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 CFHR5Q9BXR6 569 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 PRDM13Q9H4Q3 707 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 MYH6P13533 1939 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 RGPD8O14715 1765 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 MARCH11A6NNE9 402 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 NBR2O15453 112 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 EFNA2O43921 213 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 SYNJ2BPP57105 145 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 RPL15P61313 204 aaKnown RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 PMCHL1Q16048 86 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 OR8D4Q8NGM9 314 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 ZNF721Q8TF20 911 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 LSM4Q9Y4Z0 139 aaKnown RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 RAMP1O60894 148 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 MMP23AO75900 390 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 CISD3P0C7P0 127 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 PEBP1P30086 187 aaKnown RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 GAS1P54826 345 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 BHLHA9Q7RTU4 235 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 HMGCLL1Q8TB92 370 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 SLC25A38Q96DW6 304 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 PMCHL2Q9BQD1 86 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 MBNL3Q9NUK0 354 aaKnown RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 ATP6V0CP27449 155 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 HSPE1P61604 102 aaKnown RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-203ENST00000357654 FGFRL1Q8N441 504 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 ATP6V0BQ99437 205 aa4.88□□□□□ -1.63
BRCA1-203ENST00000357654 NPIPB13A6NJU9 1138 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 NPIPB5A8MRT5 1133 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 CTDSPLO15194 276 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 PRTN3P24158 256 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 TIRAPP58753 221 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 TEX38Q6PEX7 206 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 ORMDL3Q8N138 153 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 BMPERQ8N8U9 685 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 PDFQ9HBH1 243 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 LMO1P25800 156 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 GAGE6Q13070 117 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 SMIM4Q8WVI0 70 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 Q9H3A6 140 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 MYH13Q9UKX3 1938 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 PRSS29PA6NIE9 313 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 LBHQ53QV2 105 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-203ENST00000357654 LCN12Q6JVE5 192 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 C17orf47Q8NEP4 570 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 GTSF1Q8WW33 167 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 RBM38Q9H0Z9 239 aaKnown RBP4.87□□□□□ -1.63
BRCA1-203ENST00000357654 GTSF1LQ9H1H1 148 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 DTX4Q9Y2E6 619 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 TOGARAM1Q9Y4F4 1720 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 TRAV8-3A0A0A6YYJ7 113 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 B4DSR2 109 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 IGHG3P01860 377 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 UMODP07911 640 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 NAT1P18440 290 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 ATXN8Q156A1 80 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 FAM74A3Q4VXF1 159 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 ZNF525Q8N782 197 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 TMEM158Q8WZ71 300 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 A0A087WWL8 130 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 PGLYRP1O75594 196 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-203ENST00000357654 UBE2AP49459 152 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 SEC61GP60059 68 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 CENPWQ5EE01 88 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 Q6ZQT7 251 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 SDHCQ99643 169 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-203ENST00000357654 KLHDC2Q9Y2U9 406 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 LEPROTO15243 131 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 ALX3O95076 343 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 IGF2P01344 180 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 COX6A1P12074 109 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 IGFBP2P18065 325 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 ZNF146Q15072 292 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 CYB561D1Q8N8Q1 229 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 TMEM105Q8N8V8 129 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 ZNF503Q96F45 646 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 NDUFAF3Q9BU61 184 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 NEU3Q9UQ49 428 aa4.87□□□□□ -1.63
BRCA1-203ENST00000357654 MYH14Q7Z406 1995 aaKnown RBP4.86□□□□□ -1.63
BRCA1-203ENST00000357654 IGKV2-40A0A087WW87 121 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-203ENST00000357654 IGKV2D-40P01614 121 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-203ENST00000357654 C1QAP02745 245 aa4.86□□□□□ -1.63
BRCA1-203ENST00000357654 CELA3BP08861 270 aa4.86□□□□□ -1.63
BRCA1-203ENST00000357654 CECR9P0C854 216 aa4.86□□□□□ -1.63
BRCA1-203ENST00000357654 BCL2P10415 239 aa4.86□□□□□ -1.63
BRCA1-203ENST00000357654 PLNP26678 52 aa4.86□□□□□ -1.63
BRCA1-203ENST00000357654 PMVKQ15126 192 aa4.86□□□□□ -1.63
BRCA1-203ENST00000357654 IGFL4Q6B9Z1 124 aa4.86□□□□□ -1.63
BRCA1-203ENST00000357654 SLC25A45Q8N413 288 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms