RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FUT5Q11128 374 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 PILRAQ9UKJ1 303 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 SERF1AO75920 110 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 FAM106CPP0CH98 169 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 RUNX1Q01196 453 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 DNASE2BQ8WZ79 361 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 CLEC1BQ9P126 229 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 INSIG2Q9Y5U4 225 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 GPR6P46095 362 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-202ENST00000357162 RIPPLY3P57055 190 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 TNFRSF14Q92956 283 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 RTBDNQ9BSG5 229 aaPredicted RBP5.6□□□□□ -1.51
VPS13B-202ENST00000357162 EXPH5Q8NEV8 1989 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 OR5AN1Q8NGI8 311 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 CALYQ9NYX4 217 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 IL36RNQ9UBH0 155 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 K7EMI3 77 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 CD5LO43866 347 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 DEFB103AP81534 67 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 SLC25A53Q5H9E4 307 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 LHX9Q9NQ69 397 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 DRD3P35462 400 aa5.6□□□□□ -1.51
VPS13B-202ENST00000357162 DUSP15Q9H1R2 295 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-202ENST00000357162 UPK2O00526 184 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 LDLRAD2Q5SZI1 272 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 SNRPD3P62318 126 aaKnown RBP5.59□□□□□ -1.51
VPS13B-202ENST00000357162 ATXN8Q156A1 80 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 COA6Q5JTJ3 125 aaKnown RBP5.59□□□□□ -1.51
VPS13B-202ENST00000357162 EBLN2Q6P2I7 272 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 ZNF106Q9H2Y7 1883 aaKnown RBP5.59□□□□□ -1.51
VPS13B-202ENST00000357162 A0A0G2JMM0 328 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 A0A1W2PPB8 328 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 KIR3DP1A8MWS1 328 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 TMPRSS2O15393 492 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 C3AR1Q16581 482 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 WNT5BQ9H1J7 359 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 SMAD2Q15796 467 aaKnown RBP5.59□□□□□ -1.51
VPS13B-202ENST00000357162 MIC13Q5XKP0 118 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 RNF182Q8N6D2 247 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 TMUB1Q9BVT8 246 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 GDF15Q99988 308 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 CD3EP07766 207 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 FBXO17Q96EF6 278 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 PLSCR4Q9NRQ2 329 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 TET2Q6N021 2002 aaPredicted RBP5.59□□□□□ -1.51
VPS13B-202ENST00000357162 TNXAQ16473 311 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 PIGYQ3MUY2 71 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 FGF11Q92914 225 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 CHAC1Q9BUX1 264 aa5.59□□□□□ -1.51
VPS13B-202ENST00000357162 ANOS1P23352 680 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 CXorf66Q5JRM2 361 aaPredicted RBP5.59□□□□□ -1.52
VPS13B-202ENST00000357162 KLHDC2Q9Y2U9 406 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 A0A1W2PP11 408 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 OR2H2O95918 312 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 TAL2Q16559 108 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 PYY3Q5JQD4 70 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 KLF17Q5JT82 389 aaPredicted RBP5.59□□□□□ -1.52
VPS13B-202ENST00000357162 RTN4RL2Q86UN3 420 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 SMIM10L1P0DMW3 83 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 BHLHA15Q7RTS1 189 aaPredicted RBP5.59□□□□□ -1.52
VPS13B-202ENST00000357162 NEGR1Q7Z3B1 354 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF775Q96BV0 537 aaPredicted RBP5.59□□□□□ -1.52
VPS13B-202ENST00000357162 SMIM10Q96HG1 83 aa5.59□□□□□ -1.52
VPS13B-202ENST00000357162 OCIAD2Q56VL3 154 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 SLC25A39Q9BZJ4 359 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-202ENST00000357162 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 MESP1Q9BRJ9 268 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 SRSF1Q07955 248 aaKnown RBP eCLIP5.58□□□□□ -1.52
VPS13B-202ENST00000357162 IGKV3-11P04433 115 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 LHFPL1Q86WI0 220 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 OR1K1Q8NGR3 316 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 FOXS1O43638 330 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 MMDQ15546 238 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 LHX8Q68G74 356 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 IGKV1-8A0A0C4DH67 115 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 NBEAP1P0C6P0 100 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 SRSF6Q13247 344 aaKnown RBP5.58□□□□□ -1.52
VPS13B-202ENST00000357162 RGP1Q92546 391 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-202ENST00000357162 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 UNC119Q13432 240 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 SAMD5Q5TGI4 173 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 HDHD3Q9BSH5 251 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-202ENST00000357162 CFHR5Q9BXR6 569 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 LDLRAD4O15165 306 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 SIVA1O15304 175 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 COL10A1Q03692 680 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 SFTA2Q6UW10 78 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 RFESDQ8TAC1 157 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF479Q96JC4 524 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 TRGV8A0A0C4DH27 118 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 PRR33A8MZF0 331 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 FAM214BQ7L5A3 538 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 RPRMLQ8N4K4 120 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 C3orf80F5H4A9 247 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 UCNP55089 124 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 ZNF525Q8N782 197 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 NABP2Q9BQ15 211 aa5.58□□□□□ -1.52
VPS13B-202ENST00000357162 BPTFQ12830 3046 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms