RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 LRRC30A6NM36 301 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 ZNF785A8K8V0 405 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 A8MWL6 223 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 TMEM177Q53S58 311 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 ZNF525Q8N782 197 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 TMEM171Q8WVE6 324 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 GUCD1Q96NT3 240 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 PTPRSQ13332 1948 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 DENND4AQ7Z401 1863 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 TLN1Q9Y490 2541 aaKnown RBP11.83□□□□□ -0.52
SREBF1-202ENST00000355815 LGALS4P56470 323 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 C1QTNF5Q9BXJ0 243 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 TRBV24-1A0A075B6N3 115 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 TRBV6-7A0A0A0MS04 114 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 OOEPA6NGQ2 149 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 RPL13AP40429 203 aaKnown RBP11.83□□□□□ -0.52
SREBF1-202ENST00000355815 C1orf194Q5T5A4 169 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 ZNF324BQ6AW86 544 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-202ENST00000355815 ZNRF1Q8ND25 227 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 NPCDR1Q9BY65 106 aa11.83□□□□□ -0.52
SREBF1-202ENST00000355815 PEF1Q9UBV8 284 aaKnown RBP11.83□□□□□ -0.52
SREBF1-202ENST00000355815 IGKV3-7A0A075B6H7 116 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 PSG7Q13046 419 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 TNXAQ16473 311 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 LRRC75BQ2VPJ9 315 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 FAM53AQ6NSI3 398 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-202ENST00000355815 OR5P3Q8WZ94 311 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 MCRIP2Q9BUT9 160 aaKnown RBP11.82□□□□□ -0.52
SREBF1-202ENST00000355815 TYMSP04818 313 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 B3GALT5-AS1P59052 145 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 ARF6P62330 175 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 HCP5Q6MZN7 132 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 ZNF502Q8TBZ5 544 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 HARBI1Q96MB7 349 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 ZFP30Q9Y2G7 519 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 AMMECR1Q9Y4X0 333 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-202ENST00000355815 ODAMA1E959 279 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 TMPRSS2O15393 492 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 CLDN14O95500 239 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 AMY1AP04745 511 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 ACP1P24666 158 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 GCHFRP30047 84 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 MPV17P39210 176 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 TDGF1P3P51864 188 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 SPSB4Q96A44 273 aa11.82□□□□□ -0.52
SREBF1-202ENST00000355815 PSMG3Q9BT73 122 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-202ENST00000355815 IGHV3-72A0A0B4J1Y9 119 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 IGF2RP11717 2491 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 UCP1P25874 307 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 RIGQ13278 110 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 GBGT1Q8N5D6 347 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 KLK15Q9H2R5 256 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 F5H697 171 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 FTH1P19P0C7X4 201 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 COX7A1P24310 79 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 GNB2P62879 340 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 OCC1Q8TAD7 63 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 LSM4Q9Y4Z0 139 aaKnown RBP11.81□□□□□ -0.52
SREBF1-202ENST00000355815 KLF2Q9Y5W3 355 aaPredicted RBP11.81□□□□□ -0.52
SREBF1-202ENST00000355815 VMA21Q3ZAQ7 101 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 TPTE2P1Q5T6R2 138 aa11.81□□□□□ -0.52
SREBF1-202ENST00000355815 A0A1W2PN81 502 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 VENTXO95231 258 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 TGFAP01135 160 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 C20orf204Q6ZNR8 217 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 DNM1P46Q6ZS02 220 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 ZCCHC24Q8N2G6 241 aaKnown RBP11.8□□□□□ -0.52
SREBF1-202ENST00000355815 BEND2Q8NDZ0 799 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 CXXC4Q9H2H0 198 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 IL36BQ9NZH7 164 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 THYN1Q9P016 225 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 PRRG2O14669 202 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 TNFSF13O75888 250 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 IGHV2-5P01817 119 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 TRAV8-6A0A0B4J262 113 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 TRAV24A0A0B4J272 114 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 C7orf71A4D174 169 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 ZNF503-AS2A6NEH8 195 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 PRDX2P32119 198 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 Q6ZVH6 145 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 TMEM45BQ96B21 275 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 IFNL4K9M1U5 179 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 RPL8P62917 257 aaKnown RBP11.8□□□□□ -0.52
SREBF1-202ENST00000355815 SPCS1Q9Y6A9 102 aa11.8□□□□□ -0.52
SREBF1-202ENST00000355815 STPG3Q8N7X2 389 aa11.79□□□□□ -0.52
SREBF1-202ENST00000355815 SEBOXQ9HB31 216 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-202ENST00000355815 MYO15AQ9UKN7 3530 aa11.79□□□□□ -0.52
SREBF1-202ENST00000355815 GFRA1P56159 465 aa11.79□□□□□ -0.52
SREBF1-202ENST00000355815 FOXC1Q12948 553 aa11.79□□□□□ -0.52
SREBF1-202ENST00000355815 SRSF12Q8WXF0 261 aaKnown RBP11.79□□□□□ -0.52
SREBF1-202ENST00000355815 NABP2Q9BQ15 211 aa11.79□□□□□ -0.52
SREBF1-202ENST00000355815 HSPB7Q9UBY9 170 aa11.79□□□□□ -0.52
SREBF1-202ENST00000355815 OR51B2Q9Y5P1 312 aa11.79□□□□□ -0.52
SREBF1-202ENST00000355815 NCBP2LA6PVI3 153 aaKnown RBP11.79□□□□□ -0.52
SREBF1-202ENST00000355815 TNFAIP6P98066 277 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-202ENST00000355815 SAMD13Q5VXD3 122 aa11.79□□□□□ -0.52
SREBF1-202ENST00000355815 RPP25LQ8N5L8 163 aaKnown RBP11.79□□□□□ -0.52
SREBF1-202ENST00000355815 NCOR2Q9Y618 2525 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms