RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 PLXNB1O43157 2135 aa10.85□□□□□ -0.67
HOXA1-202ENST00000355633 IGLC7A0M8Q6 106 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 OR13C7P0DN81 318 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 RNASE2P10153 161 aaKnown RBP10.84□□□□□ -0.67
HOXA1-202ENST00000355633 LRRC75BQ2VPJ9 315 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 Q8N9W7 124 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 UQCC1Q9NVA1 299 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 UBE2L5PA0A1B0GUS4 154 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 PRSS46E5RG02 174 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 SEC11BP0C7V7 166 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 FXYD3Q14802 87 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 TUSC1Q2TAM9 212 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 PIFOQ8TCI5 191 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 SCGB1C1Q8TD33 95 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 PDZD2O15018 2839 aa10.84□□□□□ -0.67
HOXA1-202ENST00000355633 RPS10-NUDT3A0A1W2PQS6 291 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 TEX22C9J3V5 150 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 FSHBP01225 129 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 REG1AP05451 166 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 SPP1P10451 314 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 ATP6V0CP27449 155 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 SUB1P53999 127 aaKnown RBP eCLIP10.83□□□□□ -0.68
HOXA1-202ENST00000355633 CLLU1Q5K131 121 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 HSD17B13Q7Z5P4 300 aaPredicted RBP10.83□□□□□ -0.68
HOXA1-202ENST00000355633 PCNPQ8WW12 178 aaKnown RBP10.83□□□□□ -0.68
HOXA1-202ENST00000355633 RASL11BQ9BPW5 248 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 GGACTQ9BVM4 153 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 WDR61Q9GZS3 305 aaKnown RBP10.83□□□□□ -0.68
HOXA1-202ENST00000355633 SH3BGRL3Q9H299 93 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 SLC25A32Q9H2D1 315 aa10.83□□□□□ -0.68
HOXA1-202ENST00000355633 APELAP0DMC3 54 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 AREGP15514 252 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 CX3CL1P78423 397 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 DLK1P80370 383 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 RUNX1Q01196 453 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 VWC2Q2TAL6 325 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 ABHD5Q8WTS1 349 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 SSMEM1Q8WWF3 244 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
HOXA1-202ENST00000355633 RBM14Q96PK6 669 aaKnown RBP10.82□□□□□ -0.68
HOXA1-202ENST00000355633 P2RX4Q99571 388 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 SRSF8Q9BRL6 282 aaKnown RBP10.82□□□□□ -0.68
HOXA1-202ENST00000355633 SLC25A33Q9BSK2 321 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 PARD6GQ9BYG4 376 aaPredicted RBP10.82□□□□□ -0.68
HOXA1-202ENST00000355633 UNC79Q9P2D8 2635 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 H3BUX3 64 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 AANATQ16613 207 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 TMEM219Q86XT9 240 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 BCL6BQ8N143 479 aaPredicted RBP10.82□□□□□ -0.68
HOXA1-202ENST00000355633 RNF141Q8WVD5 230 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 ABCA1O95477 2261 aa10.82□□□□□ -0.68
HOXA1-202ENST00000355633 MAP1AP78559 2803 aaPredicted RBP10.81□□□□□ -0.68
HOXA1-202ENST00000355633 MDFIC2A0A1B0GVS7 189 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 SMCO3A2RU48 225 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 TRIM77I1YAP6 450 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 HLA-DRB1P01911 266 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 DEFB112Q30KQ8 113 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 ZNF114Q8NC26 417 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 C22orf15Q8WYQ4 148 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 ARPC1AQ92747 370 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 TAF15Q92804 592 aaKnown RBP eCLIP10.81□□□□□ -0.68
HOXA1-202ENST00000355633 FAM103A1Q9BTL3 118 aaKnown RBP10.81□□□□□ -0.68
HOXA1-202ENST00000355633 MOB4Q9Y3A3 225 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 SVEP1Q4LDE5 3571 aa10.81□□□□□ -0.68
HOXA1-202ENST00000355633 NMBP08949 121 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 FGF7P21781 194 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 SULT1A2P50226 295 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 C5orf56Q8N8D9 126 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 OR2G3Q8NGZ4 309 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 LRRC20Q8TCA0 184 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 RSG1Q9BU20 258 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 RFNGQ9Y644 331 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 CSMD1Q96PZ7 3565 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 FGF16O43320 207 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 FAM157CP0CG43 387 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 NDPQ00604 133 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 LY6EQ16553 131 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 ARSJQ5FYB0 599 aaPredicted RBP10.8□□□□□ -0.68
HOXA1-202ENST00000355633 C9orf139Q6ZV77 190 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
HOXA1-202ENST00000355633 PLA2G2EQ9NZK7 142 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 PITPNC1Q9UKF7 332 aa10.8□□□□□ -0.68
HOXA1-202ENST00000355633 CREBBPQ92793 2442 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 A6NDX4 124 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 CD69Q07108 199 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 TMEM182Q6ZP80 229 aaPredicted RBP10.79□□□□□ -0.68
HOXA1-202ENST00000355633 OR1P1Q8NH06 330 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 CITED4Q96RK1 184 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 HSPB9Q9BQS6 159 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 WDR83OSQ9Y284 106 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 F11RQ9Y624 299 aaKnown RBP10.79□□□□□ -0.68
HOXA1-202ENST00000355633 FNDC10F2Z333 226 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 BTNL8Q6UX41 500 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 TREML4Q6UXN2 200 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 TEX29Q8N6K0 151 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 PSMG3Q9BT73 122 aaPredicted RBP10.79□□□□□ -0.68
HOXA1-202ENST00000355633 NPVFQ9HCQ7 196 aa10.79□□□□□ -0.68
HOXA1-202ENST00000355633 ZNF705EA8MWA4 302 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms