RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 FAM96BQ9Y3D0 163 aa13.76□□□□□ -0.21
VPS13B-201ENST00000355155 IGHV3-72A0A0B4J1Y9 119 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 IGHV4-61A0A0C4DH41 118 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 LOC102723971A0A1B0GUV8 181 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 YIF1AO95070 293 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 SLC25A16P16260 332 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 SVBPQ8N300 66 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 SLC35E1Q96K37 410 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 SLC45A2Q9UMX9 530 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 SFTA3P0C7M3 94 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 ATP5J2P56134 94 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 OR10G9Q8NGN4 311 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 OR10G7Q8NGN6 311 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 SFT2D1Q8WV19 159 aa13.75□□□□□ -0.21
VPS13B-201ENST00000355155 EAF1Q96JC9 268 aaPredicted RBP13.75□□□□□ -0.21
VPS13B-201ENST00000355155 A0A096LNT2 108 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 CYB5BO43169 146 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 ICAM4Q14773 271 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 UBR5O95071 2799 aaPredicted RBP13.74□□□□□ -0.21
VPS13B-201ENST00000355155 CORTO00230 105 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 SNRNP70P08621 437 aaKnown RBP13.74□□□□□ -0.21
VPS13B-201ENST00000355155 ZNF787Q6DD87 383 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 LRRC75A-AS1Q8N1F1 130 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 DYNAPQ8N1N2 210 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 OR1P1Q8NH06 330 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 SLC35B3Q9H1N7 401 aa13.74□□□□□ -0.21
VPS13B-201ENST00000355155 RAB31Q13636 194 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 GAMTQ14353 236 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 C19orf24Q9BVV8 132 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 DCHS2Q6V1P9 2916 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 MAP1LC3B2A6NCE7 125 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 AGPAT2O15120 278 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 LINC00869P0C866 280 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 PRB3Q04118 309 aaPredicted RBP13.73□□□□□ -0.21
VPS13B-201ENST00000355155 MAP1LC3BQ9GZQ8 125 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 TMEM231Q9H6L2 316 aa13.73□□□□□ -0.21
VPS13B-201ENST00000355155 F8W036 122 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 SRP19P09132 144 aaKnown RBP13.72□□□□□ -0.21
VPS13B-201ENST00000355155 C10orf55Q5SWW7 151 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 SLC16A13Q7RTY0 426 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 HINT2Q9BX68 163 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 BEX4Q9NWD9 120 aaPredicted RBP13.72□□□□□ -0.21
VPS13B-201ENST00000355155 PXMP4Q9Y6I8 212 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 PPT1P50897 306 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 C5orf64Q2M2E5 130 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 SLC39A9Q9NUM3 307 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 F11RQ9Y624 299 aaKnown RBP13.72□□□□□ -0.21
VPS13B-201ENST00000355155 IGHV4-30-2A0A087WSY4 118 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 ELLP55199 621 aaPredicted RBP13.72□□□□□ -0.21
VPS13B-201ENST00000355155 AKR1C1Q04828 323 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 OR1L6Q8NGR2 347 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 FBXL15Q9H469 300 aa13.72□□□□□ -0.21
VPS13B-201ENST00000355155 OPN1MWP04001 364 aa13.71□□□□□ -0.21
VPS13B-201ENST00000355155 OPN1MW2P0DN77 364 aa13.71□□□□□ -0.21
VPS13B-201ENST00000355155 OPN1MW3P0DN78 364 aa13.71□□□□□ -0.21
VPS13B-201ENST00000355155 BCL2P10415 239 aa13.71□□□□□ -0.21
VPS13B-201ENST00000355155 GATA3P23771 443 aa13.71□□□□□ -0.21
VPS13B-201ENST00000355155 TNXAQ16473 311 aa13.71□□□□□ -0.21
VPS13B-201ENST00000355155 NBASA2RRP1 2371 aa13.71□□□□□ -0.21
VPS13B-201ENST00000355155 NPFFO15130 113 aa13.71□□□□□ -0.22
VPS13B-201ENST00000355155 APOC3P02656 99 aa13.71□□□□□ -0.22
VPS13B-201ENST00000355155 LGALS4P56470 323 aa13.71□□□□□ -0.22
VPS13B-201ENST00000355155 SRSF12Q8WXF0 261 aaKnown RBP13.71□□□□□ -0.22
VPS13B-201ENST00000355155 MANBALQ9NQG1 85 aa13.71□□□□□ -0.22
VPS13B-201ENST00000355155 HILPDAQ9Y5L2 63 aa13.71□□□□□ -0.22
VPS13B-201ENST00000355155 CENPVL3A0A0U1RRI6 287 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 SNAPINO95295 136 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 IFNA1P01562 189 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 OR13C7P0DN81 318 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 RAB24Q969Q5 203 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 NARS2Q96I59 477 aaKnown RBP13.7□□□□□ -0.22
VPS13B-201ENST00000355155 EIF5A2Q9GZV4 153 aaKnown RBP13.7□□□□□ -0.22
VPS13B-201ENST00000355155 MEGF9Q9H1U4 602 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 FNDC4Q9H6D8 234 aaPredicted RBP13.7□□□□□ -0.22
VPS13B-201ENST00000355155 IGKV1OR2-108A0A075B7D4 117 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 CDC34P49427 236 aaPredicted RBP13.7□□□□□ -0.22
VPS13B-201ENST00000355155 PSMB3P49720 205 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 MFAP2P55001 183 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 ZNF562Q6V9R5 426 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 LRBAP50851 2863 aa13.7□□□□□ -0.22
VPS13B-201ENST00000355155 PSMB11A5LHX3 300 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 STAG3L2P0CL84 134 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 STAG3L3P0CL85 134 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 STPG3Q8N7X2 389 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 RARRES2Q99969 163 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 NKX6-2Q9C056 277 aaPredicted RBP13.69□□□□□ -0.22
VPS13B-201ENST00000355155 VAX2Q9UIW0 290 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 ARL2-SNX15V9GYD0 113 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 CTRB1P17538 263 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 GUCA2BQ16661 112 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 CTRB2Q6GPI1 263 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 ATRAIDQ6UW56 229 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 RBMS3Q6XE24 437 aaKnown RBP13.69□□□□□ -0.22
VPS13B-201ENST00000355155 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 SUN5Q8TC36 379 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
VPS13B-201ENST00000355155 SMCO3A2RU48 225 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 NPIPB5A8MRT5 1133 aa13.68□□□□□ -0.22
VPS13B-201ENST00000355155 ACTL6BO94805 426 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms