RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 PAX8Q06710 450 aa11.31□□□□□ -0.6
LMBR1-201ENST00000353442 IL17RELQ6ZVW7 336 aa11.31□□□□□ -0.6
LMBR1-201ENST00000353442 G6PC2Q9NQR9 355 aa11.31□□□□□ -0.6
LMBR1-201ENST00000353442 MT-ND6P03923 174 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 PMCHL1Q16048 86 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 IMMP1LQ96LU5 166 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 GHRHP01286 108 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 WDFY2Q96P53 400 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 ZNF474Q6S9Z5 364 aaPredicted RBP11.3□□□□□ -0.6
LMBR1-201ENST00000353442 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 SRSF6Q13247 344 aaKnown RBP11.3□□□□□ -0.6
LMBR1-201ENST00000353442 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
LMBR1-201ENST00000353442 SRSF4Q08170 494 aaKnown RBP11.3□□□□□ -0.6
LMBR1-201ENST00000353442 SIGLEC15Q6ZMC9 328 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 TMEM126AQ9H061 195 aa11.3□□□□□ -0.6
LMBR1-201ENST00000353442 TRGV11A0A075B6L2 103 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 LINC00299Q6ZSB3 139 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 RP1L1Q8IWN7 2480 aaPredicted RBP11.29□□□□□ -0.6
LMBR1-201ENST00000353442 SIGLEC1Q9BZZ2 1709 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 PAPPAQ13219 1627 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 C17orf98A8MV24 154 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 MIR17HGQ75NE6 70 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 H3BUX3 64 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 Q96MF0 132 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 ZNFX1Q9P2E3 1918 aaKnown RBP11.29□□□□□ -0.6
LMBR1-201ENST00000353442 TIMM23O14925 209 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 ZNF257Q9Y2Q1 563 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 NDUFS5O43920 106 aa11.29□□□□□ -0.6
LMBR1-201ENST00000353442 SIRT4Q9Y6E7 314 aaPredicted RBP11.28□□□□□ -0.6
LMBR1-201ENST00000353442 A0A096LPF7 62 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 TRAV41A0A0B4J266 112 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 MARVELD1Q9BSK0 173 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 IGKV1-8A0A0C4DH67 115 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 RPL15P61313 204 aaKnown RBP11.28□□□□□ -0.6
LMBR1-201ENST00000353442 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 SDHCQ99643 169 aaPredicted RBP11.28□□□□□ -0.6
LMBR1-201ENST00000353442 KNL1Q8NG31 2342 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 NRAPQ86VF7 1730 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 CCL1P22362 96 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 HMGA2P52926 109 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 ZNF114Q8NC26 417 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 AQP3Q92482 292 aa11.28□□□□□ -0.6
LMBR1-201ENST00000353442 C6orf226Q5I0X4 101 aa11.27□□□□□ -0.6
LMBR1-201ENST00000353442 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.6
LMBR1-201ENST00000353442 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.27□□□□□ -0.6
LMBR1-201ENST00000353442 FCN3O75636 299 aa11.27□□□□□ -0.6
LMBR1-201ENST00000353442 UQCR10Q9UDW1 63 aa11.27□□□□□ -0.6
LMBR1-201ENST00000353442 C12orf77C9JDV5 145 aa11.27□□□□□ -0.61
LMBR1-201ENST00000353442 PSMG3Q9BT73 122 aaPredicted RBP11.27□□□□□ -0.61
LMBR1-201ENST00000353442 RNF114Q9Y508 228 aa11.27□□□□□ -0.61
LMBR1-201ENST00000353442 FAM19A2Q8N3H0 131 aa11.27□□□□□ -0.61
LMBR1-201ENST00000353442 MBD3L4A6NDZ8 208 aaPredicted RBP11.27□□□□□ -0.61
LMBR1-201ENST00000353442 MBD3L3A6NE82 208 aaPredicted RBP11.27□□□□□ -0.61
LMBR1-201ENST00000353442 MBD3L5A6NJ08 208 aaPredicted RBP11.27□□□□□ -0.61
LMBR1-201ENST00000353442 TGFBR3LH3BV60 316 aa11.27□□□□□ -0.61
LMBR1-201ENST00000353442 MBD3L2Q8NHZ7 208 aaPredicted RBP11.27□□□□□ -0.61
LMBR1-201ENST00000353442 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
LMBR1-201ENST00000353442 C1orf122Q6ZSJ8 110 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 C19orf24Q9BVV8 132 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 TCF23Q7RTU1 214 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 CASP8AP2Q9UKL3 1982 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 A0A1B0GUL6 1792 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 TMEM91Q6ZNR0 172 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 C1orf159Q96HA4 380 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 SSBP4Q9BWG4 385 aaPredicted RBP11.26□□□□□ -0.61
LMBR1-201ENST00000353442 FAM206AQ9NX38 181 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 IGKV2-40A0A087WW87 121 aaPredicted RBP11.26□□□□□ -0.61
LMBR1-201ENST00000353442 IGKV2D-40P01614 121 aaPredicted RBP11.26□□□□□ -0.61
LMBR1-201ENST00000353442 POC1AQ8NBT0 407 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 ZMAT4Q9H898 229 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 CCDC88CQ9P219 2028 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
LMBR1-201ENST00000353442 TM4SF5O14894 197 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 PSG7Q13046 419 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 PILRAQ9UKJ1 303 aa11.26□□□□□ -0.61
LMBR1-201ENST00000353442 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
LMBR1-201ENST00000353442 A0A1B0GUT8 65 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 WDYHV1Q96HA8 205 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 V9GYH0 126 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 LY6HO94772 140 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
LMBR1-201ENST00000353442 SLC25A39Q9BZJ4 359 aaPredicted RBP11.25□□□□□ -0.61
LMBR1-201ENST00000353442 SAA2-SAA4A0A096LPE2 208 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 SAA2P0DJI9 122 aaPredicted RBP11.25□□□□□ -0.61
LMBR1-201ENST00000353442 DSCR9P59020 149 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 TMEM249Q2WGJ8 235 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 ZNF876PQ49A33 203 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
LMBR1-201ENST00000353442 E9PQ18 207 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 ZNF562Q6V9R5 426 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 HIST1H2BAQ96A08 127 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 COQ2Q96H96 371 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 DDX60LQ5H9U9 1706 aaKnown RBP11.25□□□□□ -0.61
LMBR1-201ENST00000353442 RAG2P55895 527 aa11.25□□□□□ -0.61
LMBR1-201ENST00000353442 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms