RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ANKRD30BLA7E2S9 258 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 NPIPB11E5RHQ5 1161 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 FABP2P12104 132 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 AESQ08117 197 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 Q6ZR03 302 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 TMEM116Q8NCL8 245 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 KCNIP1Q9NZI2 227 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 TRAPPC2LQ9UL33 140 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 SDK2Q58EX2 2172 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.93□□□□□ -0.66
IFT88-202ENST00000351808 C5orf30Q96GV9 206 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 LINC00479Q96M42 142 aa10.93□□□□□ -0.66
IFT88-202ENST00000351808 HNRNPA1P09651 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
IFT88-202ENST00000351808 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 TEX45Q8NA69 505 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 MRAP2Q96G30 205 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 C1orf159Q96HA4 380 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 R4GN57 208 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 VWC2LB2RUY7 222 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 LINC00271P0C7V0 271 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 ARL4DP49703 201 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 GUSBP1Q15486 140 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 SNRNP40Q96DI7 357 aaKnown RBP10.92□□□□□ -0.66
IFT88-202ENST00000351808 IGF2BP2-AS1Q96M15 143 aa10.92□□□□□ -0.66
IFT88-202ENST00000351808 COL5A1P20908 1838 aaPredicted RBP10.92□□□□□ -0.66
IFT88-202ENST00000351808 ASXL3Q9C0F0 2248 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 GGTLC3B5MD39 225 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 FGF6P10767 208 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 KIR2DL1P43626 348 aaPredicted RBP10.91□□□□□ -0.66
IFT88-202ENST00000351808 FAM162BQ5T6X4 162 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 LINC00696Q6ZRV3 163 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 MBD6Q96DN6 1003 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 C19orf24Q9BVV8 132 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 FER1L5A0AVI2 2057 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 CCNOP22674 350 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 SAMD5Q5TGI4 173 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 CHCHD1Q96BP2 118 aaKnown RBP10.91□□□□□ -0.66
IFT88-202ENST00000351808 PLPPR2Q96GM1 343 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 SPATA25Q9BR10 227 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 DUSP13Q9UII6 198 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 EML6Q6ZMW3 1958 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 LIPFP07098 398 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 MYF5P13349 255 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 TM4SF4P48230 202 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 LTC4SQ16873 150 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 LINC01545Q5VT33 79 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 FA2HQ7L5A8 372 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 MRPL21Q7Z2W9 205 aaKnown RBP10.91□□□□□ -0.66
IFT88-202ENST00000351808 ABHD12Q8N2K0 398 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 OR2H1Q9GZK4 316 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 HEYLQ9NQ87 328 aaPredicted RBP10.91□□□□□ -0.66
IFT88-202ENST00000351808 IDI2-AS1Q9NZ38 188 aa10.91□□□□□ -0.66
IFT88-202ENST00000351808 C5orf49A4QMS7 147 aa10.9□□□□□ -0.66
IFT88-202ENST00000351808 ZIC3O60481 467 aa10.9□□□□□ -0.66
IFT88-202ENST00000351808 CELA3AP09093 270 aa10.9□□□□□ -0.66
IFT88-202ENST00000351808 DHRS13Q6UX07 377 aa10.9□□□□□ -0.66
IFT88-202ENST00000351808 C1QTNF5Q9BXJ0 243 aa10.9□□□□□ -0.66
IFT88-202ENST00000351808 YPEL5P62699 121 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 ATP5G2Q06055 141 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 WFDC2Q14508 124 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 C5orf64Q2M2E5 130 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 KRTAP27-1Q3LI81 207 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 OR1L3Q8NH93 324 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 FER1L6-AS2Q96M78 137 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 HEATR1Q9H583 2144 aaKnown RBP10.9□□□□□ -0.67
IFT88-202ENST00000351808 PLEKHA3Q9HB20 300 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 SH2D2AQ9NP31 389 aa10.9□□□□□ -0.67
IFT88-202ENST00000351808 KNTC1P50748 2209 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 COL6A3P12111 3177 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 A0A1W2PQF6 199 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 KLK10O43240 276 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 OR9G9P0C7N8 305 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 GATA3P23771 443 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 FCGR2BP31994 310 aaPredicted RBP10.89□□□□□ -0.67
IFT88-202ENST00000351808 NRN1LQ496H8 165 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 TM4SF20Q53R12 229 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 PARM1Q6UWI2 310 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 ZNF645Q8N7E2 425 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 GRAMD2BQ96HH9 432 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 SPAG8Q99932 426 aaPredicted RBP10.89□□□□□ -0.67
IFT88-202ENST00000351808 LINC00470Q9BZP3 86 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 NCR2O95944 276 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 SHISA2Q6UWI4 295 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 PLA2G2FQ9BZM2 168 aa10.89□□□□□ -0.67
IFT88-202ENST00000351808 LSM4Q9Y4Z0 139 aaKnown RBP10.89□□□□□ -0.67
IFT88-202ENST00000351808 J3QR89 54 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 OR5AL1P0C617 328 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 CCL2P13500 99 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 CATR1Q13166 79 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 RTL8BQ17RB0 113 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 TMEM177Q53S58 311 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 C9orf135Q5VTT2 229 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 BADQ92934 168 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 ZNF503Q96F45 646 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 CDX2Q99626 313 aaPredicted RBP10.88□□□□□ -0.67
IFT88-202ENST00000351808 TMEM167BQ9NRX6 74 aa10.88□□□□□ -0.67
IFT88-202ENST00000351808 SPANXB1Q9NS25 103 aaPredicted RBP10.88□□□□□ -0.67
IFT88-202ENST00000351808 SS18L2Q9UHA2 77 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms