RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 F8VWA3 439 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 AREGP15514 252 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 LINC00271P0C7V0 271 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 ZNF324BQ6AW86 544 aaPredicted RBP13.4□□□□□ -0.26
PTPN11-201ENST00000351677 OR10AG1Q8NH19 301 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 DMRT1Q9Y5R6 373 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 MUC21A0A0G2JKD1 596 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 MUC21A0A140T8X8 626 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 PEX7O00628 323 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 MUC21Q5SSG8 566 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 FAM90A1Q86YD7 464 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 IGKV1-27A0A075B6S5 117 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 MORN2Q502X0 79 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 COL25A1Q9BXS0 654 aaPredicted RBP13.4□□□□□ -0.26
PTPN11-201ENST00000351677 CACNA1DQ01668 2161 aa13.4□□□□□ -0.26
PTPN11-201ENST00000351677 MPZP25189 248 aa13.4□□□□□ -0.27
PTPN11-201ENST00000351677 RNF144BQ7Z419 303 aa13.4□□□□□ -0.27
PTPN11-201ENST00000351677 C17orf82Q86X59 251 aaPredicted RBP13.4□□□□□ -0.27
PTPN11-201ENST00000351677 H7C2G1 150 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 FOXH1O75593 365 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 RTN4RL2Q86UN3 420 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 RAB37Q96AX2 223 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 F11RQ9Y624 299 aaKnown RBP13.39□□□□□ -0.27
PTPN11-201ENST00000351677 IGHV1-18A0A0C4DH31 117 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 MEF2CQ06413 473 aaPredicted RBP13.39□□□□□ -0.27
PTPN11-201ENST00000351677 DNLZQ5SXM8 178 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 ARTNQ5T4W7 220 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 TEX45Q8NA69 505 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 OR52E5Q8NH55 327 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 SEMA5BQ9P283 1151 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 LOC105371267A0A1B0GV96 52 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 SLC25A34Q6PIV7 304 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 TCF24Q7RTU0 167 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 FAM131CQ96AQ9 280 aa13.39□□□□□ -0.27
PTPN11-201ENST00000351677 YPEL1O60688 119 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 HLA-DRB1P01911 266 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 TRGV3P03979 118 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 FAM74A4Q5TZK3 123 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 YPEL2Q96QA6 119 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 FBXL7Q9UJT9 491 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 C7orf71A4D174 169 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 HIST1H1AQ02539 215 aaPredicted RBP13.38□□□□□ -0.27
PTPN11-201ENST00000351677 CCL20P78556 96 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 FOXF2Q12947 444 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 RPL23P62829 140 aaKnown RBP13.38□□□□□ -0.27
PTPN11-201ENST00000351677 GPR82Q96P67 336 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 COL4A6Q14031 1691 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 C1QTNF9BB2RNN3 333 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 SIAH2O43255 324 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 DLX6P56179 175 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 TBR1Q16650 682 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 DDB2Q92466 427 aa13.38□□□□□ -0.27
PTPN11-201ENST00000351677 HAX1O00165 279 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 C21orf62-AS1Q17RA5 79 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 WNT10AQ9GZT5 417 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 GBF1Q92538 1859 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 UPK2O00526 184 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 CD59P13987 128 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 ID3Q02535 119 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 A0A087WWC5 75 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 OR9G9P0C7N8 305 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 RAB9AP51151 201 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 C12orf54Q6X4T0 127 aa13.37□□□□□ -0.27
PTPN11-201ENST00000351677 TRBV20OR9-2A0A075B6H5 130 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 GPR183P32249 361 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 GAGE10A6NGK3 116 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 LYNX1G3V0Z9 82 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 LDLRAD4O15165 306 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 LYNX1P0DP58 116 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 SUPT4H1P63272 117 aaKnown RBP13.36□□□□□ -0.27
PTPN11-201ENST00000351677 Q0VFX4 171 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 HERPUD1Q15011 391 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 SAPCD1Q5SSQ6 148 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 C5orf24Q7Z6I8 188 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 C15orf61A6NNL5 157 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 FGF16O43320 207 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 VSIRQ9H7M9 311 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 PNRC2Q9NPJ4 139 aaKnown RBP13.36□□□□□ -0.27
PTPN11-201ENST00000351677 C21orf62Q9NYP8 219 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 THADAQ6YHU6 1953 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 CD24P25063 80 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
PTPN11-201ENST00000351677 ARPC1AQ92747 370 aa13.36□□□□□ -0.27
PTPN11-201ENST00000351677 LOC107984156A0A0G2JMH3 177 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 DPRXA6NFQ7 191 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 ARL17AQ8IVW1 177 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 CACNG8Q8WXS5 425 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 HIST1H4GQ99525 98 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 GCSAMLQ5JQS6 135 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 GTF3AQ92664 365 aaKnown RBP13.35□□□□□ -0.27
PTPN11-201ENST00000351677 DUX5Q96PT3 197 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 RNASE7Q9H1E1 156 aaKnown RBP13.35□□□□□ -0.27
PTPN11-201ENST00000351677 C1QTNF9P0C862 333 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 GNG5P63218 68 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 RRN3P1Q2M238 152 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 LHFPL1Q86WI0 220 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 KCNS1Q96KK3 526 aa13.35□□□□□ -0.27
PTPN11-201ENST00000351677 TBL2Q9Y4P3 447 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms