RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 CHODLQ9H9P2 273 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 UTP20O75691 2785 aaKnown RBP13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 DLX6P56179 175 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 STPG3Q8N7X2 389 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 LINC00574Q9H8X3 128 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 S4R3C0 116 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 IGHV1-3A0A0C4DH29 117 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 AKR1D1P51857 326 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 RBMS3Q6XE24 437 aaKnown RBP13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 OR52E5Q8NH55 327 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 VSTM2AQ8TAG5 236 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 NEU4Q8WWR8 484 aaPredicted RBP13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 SMIM7Q9BQ49 75 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 SCRT1Q9BWW7 348 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 FKBP11Q9NYL4 201 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 GAB2Q9UQC2 676 aa13.88□□□□□ -0.19
SMARCC2-202ENST00000347471 BUB1B-PAK6H3BSN5 160 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 MBP02144 154 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 PDPNQ86YL7 162 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 GGTLC1Q9BX51 225 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 UNKLQ9H9P5 680 aaKnown RBP13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 SMCO4Q9NRQ5 59 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 LOC102723971A0A1B0GUV8 181 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 USF1P22415 310 aaPredicted RBP13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 HTR1DP28221 377 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 DLK1P80370 383 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 OR51G1Q8NGK1 321 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 NRGNQ92686 78 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 IL6RP08887 468 aaPredicted RBP13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 NECAP1Q8NC96 275 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 OR4P4Q8NGL7 312 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 ZNF596Q8TC21 504 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 SLC35E1Q96K37 410 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 SAV1Q9H4B6 383 aaPredicted RBP13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 TLN2Q9Y4G6 2542 aa13.87□□□□□ -0.19
SMARCC2-202ENST00000347471 OR7C2O60412 319 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 BET1LQ9NYM9 111 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 ARL14EPLP0DKL9 152 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 MC5RP33032 325 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 OR5B3Q8NH48 314 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 SEPSECSQ9HD40 501 aaKnown RBP13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 AREGP15514 252 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 WT1-ASQ06250 92 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 KHDC3LQ587J8 217 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 ZNF506Q5JVG8 444 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 NPIPB3Q92617 1050 aa13.86□□□□□ -0.19
SMARCC2-202ENST00000347471 NAV2Q8IVL1 2488 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 FAM90A9PA6NNJ1 464 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 FCN1O00602 326 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 OR10J4P0C629 311 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 SLC35E3Q7Z769 313 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 VAX2Q9UIW0 290 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 OR2C1O95371 312 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 RPL27AP46776 148 aaKnown RBP13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 ZNF343Q6P1L6 599 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 DPPA3Q6W0C5 159 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 C17orf50Q8WW18 174 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 MOSP00540 346 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 OR5G3P0C626 314 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 TMEM177Q53S58 311 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 ST6GALNAC6Q969X2 333 aa13.85□□□□□ -0.19
SMARCC2-202ENST00000347471 ZFP36P26651 326 aaKnown RBP13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 GSX1Q9H4S2 264 aaPredicted RBP13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 A0A0U1RQK1 487 aa13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 C11orf94C9JXX5 98 aa13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 ATP5G3P48201 142 aa13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 YIF1AO95070 293 aa13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 RND2P52198 227 aa13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 C11orf71Q6IPW1 123 aa13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 TIMM9Q9Y5J7 89 aa13.84□□□□□ -0.19
SMARCC2-202ENST00000347471 A0A1W2PPI3 338 aa13.83□□□□□ -0.19
SMARCC2-202ENST00000347471 CRYBA1P05813 215 aa13.83□□□□□ -0.19
SMARCC2-202ENST00000347471 RNASE2P10153 161 aaKnown RBP13.83□□□□□ -0.19
SMARCC2-202ENST00000347471 PRB4P10163 310 aaPredicted RBP13.83□□□□□ -0.19
SMARCC2-202ENST00000347471 GAMTQ14353 236 aa13.83□□□□□ -0.19
SMARCC2-202ENST00000347471 LDLRAD2Q5SZI1 272 aa13.83□□□□□ -0.19
SMARCC2-202ENST00000347471 MBD3L1Q8WWY6 194 aa13.83□□□□□ -0.19
SMARCC2-202ENST00000347471 TVP23CQ96ET8 276 aa13.83□□□□□ -0.19
SMARCC2-202ENST00000347471 A6NNC1 897 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 FOXH1O75593 365 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 RNF224P0DH78 156 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 SSBP2P81877 361 aaPredicted RBP13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 UHRF2Q96PU4 802 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 DPM3Q9P2X0 92 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 ORM2P19652 201 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 C10orf91Q5T1B1 145 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 SLC16A13Q7RTY0 426 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 VMO1Q7Z5L0 202 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 PERPQ96FX8 193 aa13.83□□□□□ -0.2
SMARCC2-202ENST00000347471 MIR17HGQ75NE6 70 aa13.82□□□□□ -0.2
SMARCC2-202ENST00000347471 AMMECR1Q9Y4X0 333 aaPredicted RBP13.82□□□□□ -0.2
SMARCC2-202ENST00000347471 IGLV1-47P01700 117 aa13.82□□□□□ -0.2
SMARCC2-202ENST00000347471 Q8N7P7 452 aa13.82□□□□□ -0.2
SMARCC2-202ENST00000347471 RPS10P46783 165 aaKnown RBP13.82□□□□□ -0.2
SMARCC2-202ENST00000347471 SUB1P53999 127 aaKnown RBP eCLIP13.82□□□□□ -0.28e-6■■■□□ 15.3
SMARCC2-202ENST00000347471 PSG5Q15238 335 aa13.82□□□□□ -0.2
SMARCC2-202ENST00000347471 POU2AF1Q16633 256 aa13.82□□□□□ -0.2
SMARCC2-202ENST00000347471 KLF17Q5JT82 389 aaPredicted RBP13.82□□□□□ -0.2
SMARCC2-202ENST00000347471 TMEM167AQ8TBQ9 72 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms