RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 NDUFA5Q16718 116 aa8.73□□□□□ -1.01
ECM1-201ENST00000346569 FAM74A1Q5RGS3 127 aa8.73□□□□□ -1.01
ECM1-201ENST00000346569 EIF5AL1Q6IS14 154 aaKnown RBP8.73□□□□□ -1.01
ECM1-201ENST00000346569 ZNF562Q6V9R5 426 aa8.73□□□□□ -1.01
ECM1-201ENST00000346569 CIARTQ8N365 385 aaPredicted RBP8.73□□□□□ -1.01
ECM1-201ENST00000346569 Q8N9W7 124 aa8.73□□□□□ -1.01
ECM1-201ENST00000346569 SLC24A4Q8NFF2 622 aa8.73□□□□□ -1.01
ECM1-201ENST00000346569 KIAA1456Q9P272 454 aa8.73□□□□□ -1.01
ECM1-201ENST00000346569 RFNGQ9Y644 331 aa8.73□□□□□ -1.01
ECM1-201ENST00000346569 F8P00451 2351 aa8.73□□□□□ -1.01
ECM1-201ENST00000346569 ACTL6BO94805 426 aa8.72□□□□□ -1.01
ECM1-201ENST00000346569 IFNA5P01569 189 aa8.72□□□□□ -1.01
ECM1-201ENST00000346569 OR13C7P0DN81 318 aa8.72□□□□□ -1.01
ECM1-201ENST00000346569 DLK1P80370 383 aa8.72□□□□□ -1.01
ECM1-201ENST00000346569 CENPVQ7Z7K6 275 aaPredicted RBP8.72□□□□□ -1.01
ECM1-201ENST00000346569 HSD17B11Q8NBQ5 300 aa8.72□□□□□ -1.01
ECM1-201ENST00000346569 PCNPQ8WW12 178 aaKnown RBP8.72□□□□□ -1.01
ECM1-201ENST00000346569 SRSF12Q8WXF0 261 aaKnown RBP8.72□□□□□ -1.01
ECM1-201ENST00000346569 SRSF8Q9BRL6 282 aaKnown RBP8.72□□□□□ -1.01
ECM1-201ENST00000346569 TMEM147Q9BVK8 224 aa8.72□□□□□ -1.01
ECM1-201ENST00000346569 WDR61Q9GZS3 305 aaKnown RBP8.72□□□□□ -1.01
ECM1-201ENST00000346569 C1RLQ9NZP8 487 aa8.72□□□□□ -1.01
ECM1-201ENST00000346569 FNDC10F2Z333 226 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 IFNA4P05014 189 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 SNCAP37840 140 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 RAB14P61106 215 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 CX3CL1P78423 397 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 PLGLAQ15195 96 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 AANATQ16613 207 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 TUSC1Q2TAM9 212 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 SLC7A5P1Q8MH63 180 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 LILRB2Q8N423 598 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 LRRC20Q8TCA0 184 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 RNF141Q8WVD5 230 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 TAF15Q92804 592 aaKnown RBP eCLIP8.71□□□□□ -1.01
ECM1-201ENST00000346569 GNPNAT1Q96EK6 184 aaPredicted RBP8.71□□□□□ -1.01
ECM1-201ENST00000346569 P2RX4Q99571 388 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 SH3BGRL3Q9H299 93 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 UQCC1Q9NVA1 299 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 FAM96BQ9Y3D0 163 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 CSPG4Q6UVK1 2322 aa8.71□□□□□ -1.01
ECM1-201ENST00000346569 NF1P21359 2839 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 ABCA1O95477 2261 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 NCBP2LA6PVI3 153 aaKnown RBP8.71□□□□□ -1.02
ECM1-201ENST00000346569 FBP1P09467 338 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 EGR2P11161 476 aaPredicted RBP8.71□□□□□ -1.02
ECM1-201ENST00000346569 FXYD3Q14802 87 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 ARSJQ5FYB0 599 aaPredicted RBP8.71□□□□□ -1.02
ECM1-201ENST00000346569 HSD17B13Q7Z5P4 300 aaPredicted RBP8.71□□□□□ -1.02
ECM1-201ENST00000346569 ZNF114Q8NC26 417 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 SCGB1C1Q8TD33 95 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 SAT2Q96F10 170 aaPredicted RBP8.71□□□□□ -1.02
ECM1-201ENST00000346569 RBM14Q96PK6 669 aaKnown RBP8.71□□□□□ -1.02
ECM1-201ENST00000346569 SSX3Q99909 188 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 NPVFQ9HCQ7 196 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 MED9Q9NWA0 146 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 WDR83OSQ9Y284 106 aa8.71□□□□□ -1.02
ECM1-201ENST00000346569 IGHV7-81A0A0B4J1V7 117 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 HLA-DRB1P01911 266 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 AREGP15514 252 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 GPX4P36969 197 aaPredicted RBP8.7□□□□□ -1.02
ECM1-201ENST00000346569 SUB1P53999 127 aaKnown RBP eCLIP8.7□□□□□ -1.02
ECM1-201ENST00000346569 MFAP2P55001 183 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 GNB1P62873 340 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 RUNX1Q01196 453 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 MLANAQ16655 118 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 C9orf139Q6ZV77 190 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 MRPL41Q8IXM3 137 aaKnown RBP8.7□□□□□ -1.02
ECM1-201ENST00000346569 BCL6BQ8N143 479 aaPredicted RBP8.7□□□□□ -1.02
ECM1-201ENST00000346569 OR2G3Q8NGZ4 309 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 NANPQ8TBE9 248 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 RNASEH2CQ8TDP1 164 aaKnown RBP8.7□□□□□ -1.02
ECM1-201ENST00000346569 CACNG8Q8WXS5 425 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 PSMG3Q9BT73 122 aaPredicted RBP8.7□□□□□ -1.02
ECM1-201ENST00000346569 RSG1Q9BU20 258 aa8.7□□□□□ -1.02
ECM1-201ENST00000346569 A6NDX4 124 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 CNIH1O95406 144 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 AMY1AP04745 511 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 CRYGCP07315 174 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 CTRB1P17538 263 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 RAB5CP51148 216 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 SERF2P84101 59 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 NDPQ00604 133 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 CD69Q07108 199 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 ASPHD1Q5U4P2 390 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 CTRB2Q6GPI1 263 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 C5orf56Q8N8D9 126 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 OR1P1Q8NH06 330 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 LYPD6BQ8NI32 183 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 SSMEM1Q8WWF3 244 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 PRDM13Q9H4Q3 707 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 FNDC4Q9H6D8 234 aaPredicted RBP8.69□□□□□ -1.02
ECM1-201ENST00000346569 LSM4Q9Y4Z0 139 aaKnown RBP8.69□□□□□ -1.02
ECM1-201ENST00000346569 TIMM9Q9Y5J7 89 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 DMRT1Q9Y5R6 373 aa8.69□□□□□ -1.02
ECM1-201ENST00000346569 F11RQ9Y624 299 aaKnown RBP8.69□□□□□ -1.02
ECM1-201ENST00000346569 ITPR3Q14573 2671 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 UBE2L5PA0A1B0GUS4 154 aa8.68□□□□□ -1.02
ECM1-201ENST00000346569 UMAD1C9J7I0 102 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms