RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 TMEM160Q9NX00 188 aa12.95□□□□□ -0.34
CEACAM1-202ENST00000344391 AMY1AP04745 511 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 OR8U8P0C7N1 319 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 RNASE2P10153 161 aaKnown RBP12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 SRP14P37108 136 aaKnown RBP12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 SNCAP37840 140 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 HBG1P69891 147 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 HBG2P69892 147 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 NDPQ00604 133 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 C2orf83Q53S99 150 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 RPL7L1Q6DKI1 246 aaKnown RBP12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 C16orf82Q7Z2V1 217 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 HSD17B13Q7Z5P4 300 aaPredicted RBP12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 MRPL41Q8IXM3 137 aaKnown RBP12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 SSMEM1Q8WWF3 244 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 ARPC1AQ92747 370 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 SMR3AQ99954 134 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 SLA2Q9H6Q3 261 aa12.94□□□□□ -0.34
CEACAM1-202ENST00000344391 SCAF4O95104 1147 aaKnown RBP12.93□□□□□ -0.34
CEACAM1-202ENST00000344391 AREGP15514 252 aa12.93□□□□□ -0.34
CEACAM1-202ENST00000344391 RAB11AP62491 216 aa12.93□□□□□ -0.34
CEACAM1-202ENST00000344391 CLINT1Q14677 625 aa12.93□□□□□ -0.34
CEACAM1-202ENST00000344391 ETV3LQ6ZN32 361 aa12.93□□□□□ -0.34
CEACAM1-202ENST00000344391 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
CEACAM1-202ENST00000344391 HSPB9Q9BQS6 159 aa12.93□□□□□ -0.34
CEACAM1-202ENST00000344391 HIVEP1P15822 2718 aa12.93□□□□□ -0.34
CEACAM1-202ENST00000344391 PRSS46E5RG02 174 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 M0QZK8 103 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 LY6G6DO95868 133 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 REG1AP05451 166 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 APELAP0DMC3 54 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 HNF1AP20823 631 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 SLC38A11Q08AI6 406 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 STOML3Q8TAV4 291 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 ST8SIA2Q92186 375 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 P2RX4Q99571 388 aa12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 FAM103A1Q9BTL3 118 aaKnown RBP12.92□□□□□ -0.34
CEACAM1-202ENST00000344391 SH2D7A6NKC9 451 aaPredicted RBP12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 JTBO76095 146 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 CFDP00746 253 aaPredicted RBP12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 IFNA4P05014 189 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 EGR2P11161 476 aaPredicted RBP12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 FOSL1P15407 271 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 UBA52P62987 128 aaKnown RBP12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 ATP6V1FQ16864 119 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 UBAC2Q8NBM4 344 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 ZNF114Q8NC26 417 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 ABHD5Q8WTS1 349 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 PINX1Q96BK5 328 aaKnown RBP12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 ATP5SQ99766 215 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 FBXO7Q9Y3I1 522 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 MTORP42345 2549 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 BTBD17A6NE02 478 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 DFFBO76075 338 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 CD99P14209 185 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 PVRIGQ6DKI7 326 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 TEX261Q6UWH6 196 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
CEACAM1-202ENST00000344391 HIVEP2P31629 2446 aa12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 BORCS7-ASMTA0A0B4J1R7 106 aa12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 HOXA3O43365 443 aaPredicted RBP12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 TPT1P13693 172 aaKnown RBP12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 ZNF266Q14584 549 aa12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 ASPHD1Q5U4P2 390 aa12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 BAP18Q8IXM2 172 aa12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 SIGLECL1Q8N7X8 197 aa12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 ARV1Q9H2C2 271 aa12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 VPREB3Q9UKI3 123 aa12.9□□□□□ -0.34
CEACAM1-202ENST00000344391 CTRB1P17538 263 aa12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 EIF5AP63241 154 aaKnown RBP12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 CTRB2Q6GPI1 263 aa12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 C19orf35Q6ZS72 473 aa12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 ZNF680Q8NEM1 530 aa12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 OR1P1Q8NH06 330 aa12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 SGMS2Q8NHU3 365 aa12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 GGACTQ9BVM4 153 aa12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 F11RQ9Y624 299 aaKnown RBP12.89□□□□□ -0.35
CEACAM1-202ENST00000344391 LINC01548A6NM66 108 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 RGS13O14921 159 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 CRYGCP07315 174 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 MFAP2P55001 183 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 VWC2Q2TAL6 325 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 TTC9CQ8N5M4 171 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 LFNGQ8NES3 379 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 RNASEH2CQ8TDP1 164 aaKnown RBP12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 TMEM147Q9BVK8 224 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 PARP11Q9NR21 331 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 NPIPB5A8MRT5 1133 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 BLCAPP62952 87 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 DLK1P80370 383 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 EXOSC2Q13868 293 aaKnown RBP12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 WNT10AQ9GZT5 417 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 UQCC1Q9NVA1 299 aa12.88□□□□□ -0.35
CEACAM1-202ENST00000344391 FBXO24O75426 580 aa12.87□□□□□ -0.35
CEACAM1-202ENST00000344391 IFNA5P01569 189 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms