RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 TRAV5A0A0B4J249 113 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 GZMBP10144 247 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 EFNB3Q15768 340 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 RNF151Q2KHN1 245 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 Q6ZR03 302 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 PDPNQ86YL7 162 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 ODF3L1Q8IXM7 274 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 MGST2Q99735 147 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 VENTXO95231 258 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 GPR6P46095 362 aaPredicted RBP9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 FOXA3P55318 350 aaPredicted RBP9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 RPRMLQ8N4K4 120 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 MDS2Q8NDY4 140 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 OR1L4Q8NGR5 311 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 GUCD1Q96NT3 240 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 SCRT1Q9BWW7 348 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 S4R3C0 116 aa9.18□□□□□ -0.94
SEMA4D-201ENST00000339861 PPIHO43447 177 aaKnown RBP9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 APCSP02743 223 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 PFN1P07737 140 aaKnown RBP9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 RPL8P62917 257 aaKnown RBP9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 MBNL3Q9NUK0 354 aaKnown RBP9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 DCAF16Q9NXF7 216 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 FAM90A27PA6NNH2 459 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 MKRN2OSH3BPM6 223 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 PYYP10082 97 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 ONECUT1Q9UBC0 465 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 IGKV1D-17A0A075B6S4 117 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 TRBV6-6A0A0A6YYG2 114 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 IFITM10A6NMD0 228 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 BRS3P32247 399 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 GCSAMQ8N6F7 178 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 TCTEX1D1Q8N7M0 179 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 AP1S3Q96PC3 154 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 IDI2-AS1Q9NZ38 188 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 YTHDF2Q9Y5A9 579 aaKnown RBP9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 PGPA6NDG6 321 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 ZNF891A8MT65 544 aaPredicted RBP9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 CTAG1AP78358 180 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 KIR3DL3Q8N743 410 aa9.17□□□□□ -0.94
SEMA4D-201ENST00000339861 AHRRA9YTQ3 701 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 SS18L1O75177 396 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 LEMD1Q68G75 181 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 TEX38Q6PEX7 206 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 ST6GALNAC3Q8NDV1 305 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 MRPL20Q9BYC9 149 aaKnown RBP9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 MRPL37Q9BZE1 423 aaKnown RBP9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 ASCL3Q9NQ33 180 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 A6NNC1 897 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 C10orf142B7Z368 130 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 RPEQ96AT9 228 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 ZNF714Q96N38 554 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 NGBQ9NPG2 151 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 TMEM242Q9NWH2 141 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 AMMECR1Q9Y4X0 333 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 OTOGLQ3ZCN5 2332 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 COL8A2P25067 703 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 HINT1P49773 126 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 Q6ZSR3 168 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 LINC00479Q96M42 142 aa9.16□□□□□ -0.94
SEMA4D-201ENST00000339861 KBTBD11-OT1A0A1B0GTJ5 212 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 RBFOX2O43251 390 aaKnown RBP eCLIP9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 C8orf88P0DMB2 117 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 GNG5P63218 68 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 VAMP3Q15836 100 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 WDR73Q6P4I2 378 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 AGMATQ9BSE5 352 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 PPIAL4EA0A075B759 164 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 A0A1W2PNU3 283 aaPredicted RBP9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 NCBP2LA6PVI3 153 aaKnown RBP9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 PPIAL4DF5H284 164 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 CDX4O14627 284 aaPredicted RBP9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 IGKV1-16P04430 117 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 PPIAL4FP0DN26 164 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 TFPI2P48307 235 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 DNAJC4Q9NNZ3 241 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 TBL2Q9Y4P3 447 aaKnown RBP9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 PPIAL4AQ9Y536 164 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 CEP295Q9C0D2 2601 aa9.15□□□□□ -0.94
SEMA4D-201ENST00000339861 C16orf97H3BN30 126 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 GFRA3O60609 400 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 SAA1P0DJI8 122 aaPredicted RBP9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 DLX1P56177 255 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 LCN2P80188 198 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 SPATA45Q537H7 98 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 ERASQ7Z444 233 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 FAM90A1Q86YD7 464 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 FAM222BQ8WU58 562 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 IL36BQ9NZH7 164 aa9.15□□□□□ -0.95
SEMA4D-201ENST00000339861 TLN1Q9Y490 2541 aaKnown RBP9.14□□□□□ -0.95
SEMA4D-201ENST00000339861 IGHV3-35A0A0C4DH35 117 aa9.14□□□□□ -0.95
SEMA4D-201ENST00000339861 J3QW42 95 aa9.14□□□□□ -0.95
SEMA4D-201ENST00000339861 CRYABP02511 175 aaKnown RBP9.14□□□□□ -0.95
SEMA4D-201ENST00000339861 COL8A1P27658 744 aa9.14□□□□□ -0.95
SEMA4D-201ENST00000339861 GLRXP35754 106 aa9.14□□□□□ -0.95
SEMA4D-201ENST00000339861 ZNF134P52741 427 aa9.14□□□□□ -0.95
SEMA4D-201ENST00000339861 ERVK11-1P61568 191 aa9.14□□□□□ -0.95
SEMA4D-201ENST00000339861 WDR31Q8NA23 367 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms