RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RNF183Q96D59 192 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 KRTAP17-1Q9BYP8 105 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 TMEM140Q9NV12 185 aa11.58□□□□□ -0.56
LINC01116-202ENST00000339037 OR2T8A6NH00 312 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 OR4C46A6NHA9 309 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 UPK2O00526 184 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 TNFAIP8O95379 198 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 PMP2P02689 132 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 RLN1P04808 185 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 EIF4EP06730 217 aaKnown RBP11.57□□□□□ -0.56
LINC01116-202ENST00000339037 FGF2P09038 288 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 RPA2P15927 270 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 DMBX1Q8NFW5 382 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 OR10W1Q8NGF6 305 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 BSCL2Q96G97 398 aaPredicted RBP11.57□□□□□ -0.56
LINC01116-202ENST00000339037 ZNF2Q9BSG1 426 aaPredicted RBP11.57□□□□□ -0.56
LINC01116-202ENST00000339037 FXYD6Q9H0Q3 95 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 VCX3AQ9NNX9 186 aa11.57□□□□□ -0.56
LINC01116-202ENST00000339037 OR13C7P0DN81 318 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 RPL35AP18077 110 aaKnown RBP11.56□□□□□ -0.56
LINC01116-202ENST00000339037 NAT1P18440 290 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 NCS1P62166 190 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 THOC7Q6I9Y2 204 aaKnown RBP11.56□□□□□ -0.56
LINC01116-202ENST00000339037 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 SPSB3Q6PJ21 355 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 DHRS11Q6UWP2 260 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 HSD17B13Q7Z5P4 300 aaPredicted RBP11.56□□□□□ -0.56
LINC01116-202ENST00000339037 SLC25A46Q96AG3 418 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 MOB3AQ96BX8 217 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 C20orf24Q9BUV8 137 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 PLEKHA2Q9HB19 425 aa11.56□□□□□ -0.56
LINC01116-202ENST00000339037 NDUFA4O00483 81 aa11.55□□□□□ -0.56
LINC01116-202ENST00000339037 SERPINE2P07093 398 aa11.55□□□□□ -0.56
LINC01116-202ENST00000339037 WT1-ASQ06250 92 aa11.55□□□□□ -0.56
LINC01116-202ENST00000339037 OR5H2Q8NGV7 314 aa11.55□□□□□ -0.56
LINC01116-202ENST00000339037 CD300LFQ8TDQ1 290 aa11.55□□□□□ -0.56
LINC01116-202ENST00000339037 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
LINC01116-202ENST00000339037 GALNT14Q96FL9 552 aa11.55□□□□□ -0.56
LINC01116-202ENST00000339037 COMMD9Q9P000 198 aa11.55□□□□□ -0.56
LINC01116-202ENST00000339037 IGHV3OR16-8A0A075B7F1 116 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 MARCH11A6NNE9 402 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 PGLYRP1O75594 196 aaPredicted RBP11.54□□□□□ -0.56
LINC01116-202ENST00000339037 DEDDO75618 318 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 TRAPPC2P0DI81 140 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 TRAPPC2BP0DI82 140 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 F2RP25116 425 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 PRSS3P35030 304 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 TAS2R46P59540 309 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 SLC25A24Q6NUK1 477 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 LYSMD2Q8IV50 215 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 OR5B3Q8NH48 314 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 BORCS5Q969J3 196 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 ATP6V0BQ99437 205 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 CHRDL1Q9BU40 450 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 FUNDC2Q9BWH2 189 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 C6orf62Q9GZU0 229 aaPredicted RBP11.54□□□□□ -0.56
LINC01116-202ENST00000339037 MAP6D1Q9H9H5 199 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 C21orf62Q9NYP8 219 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 COMMD3Q9UBI1 195 aa11.54□□□□□ -0.56
LINC01116-202ENST00000339037 IGHV3-21A0A0B4J1V1 117 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 HLA-DMAP28067 261 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 HRH1P35367 487 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 ERVK-16P61578 105 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 VBP1P61758 197 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 LGALS9CQ6DKI2 356 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 UBAC2Q8NBM4 344 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 OR1L8Q8NGR8 309 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 GPX8Q8TED1 209 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 FCAMRQ8WWV6 532 aa11.53□□□□□ -0.56
LINC01116-202ENST00000339037 F11RQ9Y624 299 aaKnown RBP11.53□□□□□ -0.56
LINC01116-202ENST00000339037 TEX50A0A1B0GTY4 177 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 C15orf62A8K5M9 175 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 K7EMT4 169 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 ZNF207O43670 478 aaKnown RBP11.52□□□□□ -0.57
LINC01116-202ENST00000339037 KRASP01116 189 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
LINC01116-202ENST00000339037 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.57
LINC01116-202ENST00000339037 LPAR6P43657 344 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 MFAP2P55001 183 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 APRG1Q8IVJ8 170 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 OR6F1Q8NGZ6 308 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 SCARB1Q8WTV0 552 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 LSM10Q969L4 123 aaKnown RBP11.52□□□□□ -0.57
LINC01116-202ENST00000339037 DGCR14Q96DF8 476 aaKnown RBP11.52□□□□□ -0.57
LINC01116-202ENST00000339037 HINT2Q9BX68 163 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 NSG2Q9Y328 171 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 KIAA1109Q2LD37 5005 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 DNAH6Q9C0G6 4158 aa11.52□□□□□ -0.57
LINC01116-202ENST00000339037 GPR31O00270 319 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 APOA1P02647 267 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 ELK1P19419 428 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 ADMP35318 185 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 G6PCP35575 357 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 PHLDA2Q53GA4 152 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 Q56UQ5 140 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 SNX29P2Q8IUI4 249 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 CMTM1Q8IZ96 169 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 CSTL1Q9H114 145 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 NDUFA4L2Q9NRX3 87 aa11.51□□□□□ -0.57
LINC01116-202ENST00000339037 MPTX1A8MV57 137 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms