RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 INS-IGF2F8WCM5 200 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 RNASE2P10153 161 aaKnown RBP11.68□□□□□ -0.54
CBX3-201ENST00000337620 BPIFB3P59826 476 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 LRRC75BQ2VPJ9 315 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 EIF5AL1Q6IS14 154 aaKnown RBP11.68□□□□□ -0.54
CBX3-201ENST00000337620 MRPL41Q8IXM3 137 aaKnown RBP11.68□□□□□ -0.54
CBX3-201ENST00000337620 BCL6BQ8N143 479 aaPredicted RBP11.68□□□□□ -0.54
CBX3-201ENST00000337620 Q8N9W7 124 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 SCGB1C1Q8TD33 95 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 SSMEM1Q8WWF3 244 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 RASL11BQ9BPW5 248 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 SH3BGRL3Q9H299 93 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 SLC25A32Q9H2D1 315 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 TEX22C9J3V5 150 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 H3BUX3 64 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 SCAF4O95104 1147 aaKnown RBP11.68□□□□□ -0.54
CBX3-201ENST00000337620 AREGP15514 252 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 BSXQ3C1V8 233 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 C2orf83Q53S99 150 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 ABHD5Q8WTS1 349 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 FAM103A1Q9BTL3 118 aaKnown RBP11.68□□□□□ -0.54
CBX3-201ENST00000337620 TMEM147Q9BVK8 224 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 UQCC1Q9NVA1 299 aa11.68□□□□□ -0.54
CBX3-201ENST00000337620 SMCO3A2RU48 225 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 ATP6V0CP27449 155 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.546e-13■■■■■ 133.3
CBX3-201ENST00000337620 ATP5IP56385 69 aaPredicted RBP11.67□□□□□ -0.54
CBX3-201ENST00000337620 CX3CL1P78423 397 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 RUNX1Q01196 453 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 LY6EQ16553 131 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 DEFB112Q30KQ8 113 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 P2RX4Q99571 388 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 SLC25A33Q9BSK2 321 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
CBX3-201ENST00000337620 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
CBX3-201ENST00000337620 RBM14Q96PK6 669 aaKnown RBP11.66□□□□□ -0.54
CBX3-201ENST00000337620 FSHBP01225 129 aa11.66□□□□□ -0.54
CBX3-201ENST00000337620 SPP1P10451 314 aa11.66□□□□□ -0.54
CBX3-201ENST00000337620 C19orf35Q6ZS72 473 aa11.66□□□□□ -0.54
CBX3-201ENST00000337620 ARPC1AQ92747 370 aa11.66□□□□□ -0.54
CBX3-201ENST00000337620 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
CBX3-201ENST00000337620 NAV3Q8IVL0 2385 aa11.66□□□□□ -0.54
CBX3-201ENST00000337620 SEC11BP0C7V7 166 aa11.65□□□□□ -0.54
CBX3-201ENST00000337620 CLLU1Q5K131 121 aa11.65□□□□□ -0.54
CBX3-201ENST00000337620 OR2G3Q8NGZ4 309 aa11.65□□□□□ -0.54
CBX3-201ENST00000337620 GNPNAT1Q96EK6 184 aaPredicted RBP11.65□□□□□ -0.54
CBX3-201ENST00000337620 NOTCH2Q04721 2471 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 RPS10-NUDT3A0A1W2PQS6 291 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 SH2D7A6NKC9 451 aaPredicted RBP11.65□□□□□ -0.55
CBX3-201ENST00000337620 HLA-DRB1P01911 266 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 DLK1P80370 383 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 VWC2Q2TAL6 325 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 HSD17B13Q7Z5P4 300 aaPredicted RBP11.65□□□□□ -0.55
CBX3-201ENST00000337620 RNF141Q8WVD5 230 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 TAF15Q92804 592 aaKnown RBP eCLIP11.65□□□□□ -0.55
CBX3-201ENST00000337620 RSG1Q9BU20 258 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 GGACTQ9BVM4 153 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 PLA2G2EQ9NZK7 142 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 MOB4Q9Y3A3 225 aa11.65□□□□□ -0.55
CBX3-201ENST00000337620 IGHV7-81A0A0B4J1V7 117 aa11.64□□□□□ -0.55
CBX3-201ENST00000337620 NMBP08949 121 aa11.64□□□□□ -0.55
CBX3-201ENST00000337620 FGF7P21781 194 aa11.64□□□□□ -0.55
CBX3-201ENST00000337620 NDPQ00604 133 aa11.64□□□□□ -0.55
CBX3-201ENST00000337620 MLANAQ16655 118 aa11.64□□□□□ -0.55
CBX3-201ENST00000337620 TMEM182Q6ZP80 229 aaPredicted RBP11.64□□□□□ -0.55
CBX3-201ENST00000337620 SLC7A5P1Q8MH63 180 aa11.64□□□□□ -0.55
CBX3-201ENST00000337620 C5orf56Q8N8D9 126 aa11.64□□□□□ -0.55
CBX3-201ENST00000337620 HSPB9Q9BQS6 159 aa11.64□□□□□ -0.55
CBX3-201ENST00000337620 AANATQ16613 207 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 ARSJQ5FYB0 599 aaPredicted RBP11.63□□□□□ -0.55
CBX3-201ENST00000337620 IL17RELQ6ZVW7 336 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
CBX3-201ENST00000337620 PARD6GQ9BYG4 376 aaPredicted RBP11.63□□□□□ -0.55
CBX3-201ENST00000337620 A6NDX4 124 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 FAM157CP0CG43 387 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 DEFA4P12838 97 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 BTNL8Q6UX41 500 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 SPNS3Q6ZMD2 512 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 ZNF114Q8NC26 417 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 RNASEH2CQ8TDP1 164 aaKnown RBP11.63□□□□□ -0.55
CBX3-201ENST00000337620 MISP3Q96FF7 219 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 PITPNC1Q9UKF7 332 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 FBXO7Q9Y3I1 522 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 TLN2Q9Y4G6 2542 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 MXRA5Q9NR99 2828 aa11.63□□□□□ -0.55
CBX3-201ENST00000337620 ZNF705EA8MWA4 302 aaPredicted RBP11.62□□□□□ -0.55
CBX3-201ENST00000337620 FGF16O43320 207 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 IGHV4-59P01825 116 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 OPRK1P41145 380 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 SULT1A2P50226 295 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 MFAP2P55001 183 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 AKR1C1Q04828 323 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 NDUFA5Q16718 116 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 TREML4Q6UXN2 200 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 C9orf139Q6ZV77 190 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 LFNGQ8NES3 379 aa11.62□□□□□ -0.55
CBX3-201ENST00000337620 OR1P1Q8NH06 330 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms