RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 AGMATQ9BSE5 352 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 KLRC4-KLRK1H3BQV0 150 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 TBR1Q16650 682 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 BHLHA15Q7RTS1 189 aaPredicted RBP11.13□□□□□ -0.63
COL2A1-201ENST00000337299 SAXO1Q8IYX7 474 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 PNKDQ8N490 385 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 OR5P3Q8WZ94 311 aa11.13□□□□□ -0.63
COL2A1-201ENST00000337299 SH2D7A6NKC9 451 aaPredicted RBP11.12□□□□□ -0.63
COL2A1-201ENST00000337299 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 APOHP02749 345 aaPredicted RBP11.12□□□□□ -0.63
COL2A1-201ENST00000337299 C10orf128Q5T292 105 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 TMEM265A0A087WTH1 108 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 A0A1W2PS18 150 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 FAM181BA6NEQ2 426 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 RPL7P18124 248 aaKnown RBP11.12□□□□□ -0.63
COL2A1-201ENST00000337299 LINC00205P59089 165 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 RPL39P5Q59GN2 51 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 TMEM136Q6ZRR5 245 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 MDP1Q86V88 176 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 PLPPR1Q8TBJ4 325 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 A0A1B0GWB2 263 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 GOSR1O95249 250 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 SMIM13P0DJ93 91 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 ZNF138P52744 262 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 IL11RAQ14626 422 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 DEFB124Q8NES8 71 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 OR2M7Q8NG81 312 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 TMEM186Q96B77 213 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 HARBI1Q96MB7 349 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 UFC1Q9Y3C8 167 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 AGFG2O95081 481 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 OR1N2Q8NGR9 330 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 SIGMAR1Q99720 223 aa11.12□□□□□ -0.63
COL2A1-201ENST00000337299 NOTCH4Q99466 2003 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 TRAV8-6A0A0B4J262 113 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 IZUMO1RA6ND01 250 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 ASPHD1Q5U4P2 390 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 FAM222BQ8WU58 562 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 GP6Q9HCN6 339 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 IGKV3D-11A0A0A0MRZ8 115 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 CLEC3BP05452 202 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 ADH4P08319 380 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 CD40P25942 277 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 OR10J3Q5JRS4 329 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 MRPL52Q86TS9 123 aaKnown RBP11.11□□□□□ -0.63
COL2A1-201ENST00000337299 LINC00596Q86U02 117 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 OR4F17Q8NGA8 305 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 TSKUQ8WUA8 353 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 SEPSECSQ9HD40 501 aaKnown RBP11.11□□□□□ -0.63
COL2A1-201ENST00000337299 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 DYNLRB1Q9NP97 96 aa11.11□□□□□ -0.63
COL2A1-201ENST00000337299 TRAV9-1A0A075B6T8 112 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 SLC25A17O43808 307 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 PSMB2P49721 201 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 ZNF83P51522 516 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.1□□□□□ -0.63
COL2A1-201ENST00000337299 HCP5Q6MZN7 132 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 HIST1H4GQ99525 98 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 AAMDCQ9H7C9 122 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 PRNDQ9UKY0 176 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 WDR83OSQ9Y284 106 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 MUC6Q6W4X9 2439 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 M0R1B8 84 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 ORM1P02763 201 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 GNG5P63218 68 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 PSG9Q00887 426 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 PNRC2Q9NPJ4 139 aaKnown RBP11.1□□□□□ -0.63
COL2A1-201ENST00000337299 A0A1W2PRE2 83 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 FOXH1O75593 365 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 TIAF1O95411 115 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 HSPE1P61604 102 aaKnown RBP11.1□□□□□ -0.63
COL2A1-201ENST00000337299 DEFB109BQ30KR1 87 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 PCSK4Q6UW60 755 aa11.1□□□□□ -0.63
COL2A1-201ENST00000337299 NHP2Q9NX24 153 aaKnown RBP11.1□□□□□ -0.63
COL2A1-201ENST00000337299 M0R296 226 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 CKS2P33552 79 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 EFNB3Q15768 340 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 NDFIP1Q9BT67 221 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 IGHV2OR16-5A0A0B4J2B6 119 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 H7C2G1 150 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 IGLL1P15814 213 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 PLA2G5P39877 138 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 CDKN1BP46527 198 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 TMEM54Q969K7 222 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 COL4A6Q14031 1691 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 TRAV24A0A0B4J272 114 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 MAGEA5P43359 124 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 ZNF788Q6ZQV5 615 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 TMEM178AQ8NBL3 297 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 PERPQ96FX8 193 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 CACNA1AO00555 2505 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 TGFAP01135 160 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
COL2A1-201ENST00000337299 COA6Q5JTJ3 125 aaKnown RBP11.09□□□□□ -0.63
COL2A1-201ENST00000337299 PMS2CLQ68D20 193 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 NPIPB3Q92617 1050 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
COL2A1-201ENST00000337299 MRPS18CQ9Y3D5 142 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms