RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 NPIPB7O75200 414 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 MINOS1Q5TGZ0 78 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 SRSF12Q8WXF0 261 aaKnown RBP10.38□□□□□ -0.75
FN1-202ENST00000336916 MINOS1-NBL1R4GNA1 71 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 A0A1B0GUT8 65 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 TGIF1Q15583 401 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 NABP2Q9BQ15 211 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 LOC102723996A0A087X1L8 192 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 TGFAP01135 160 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 VGLL1Q99990 258 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 RBMY1BA6NDE4 496 aaKnown RBP10.38□□□□□ -0.75
FN1-202ENST00000336916 RBMY1EA6NEQ0 496 aaKnown RBP10.38□□□□□ -0.75
FN1-202ENST00000336916 RBMY1DP0C7P1 496 aaKnown RBP10.38□□□□□ -0.75
FN1-202ENST00000336916 RBMY1A1P0DJD3 496 aaKnown RBP10.38□□□□□ -0.75
FN1-202ENST00000336916 RBMY1CP0DJD4 496 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 PRSS12P56730 875 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 LDLRAD2Q5SZI1 272 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 APCDD1LQ8NCL9 501 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 SPOCK3Q9BQ16 436 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 IGHV3-72A0A0B4J1Y9 119 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 EFNB2P52799 333 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 DRAM1Q8N682 238 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 C5orf66Q9H5L9 145 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 LINC00587B1AMM8 73 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 MALP21145 153 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 LHX2P50458 406 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 PGLYRP4Q96LB8 373 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 ARHGAP32A7KAX9 2087 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 HLA-DQB1P01920 261 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 NBEAP1P0C6P0 100 aa10.38□□□□□ -0.75
FN1-202ENST00000336916 RPL24P83731 157 aaKnown RBP10.38□□□□□ -0.75
FN1-202ENST00000336916 TRAV34A0A0B4J273 112 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 TRAV20A0A0B4J274 112 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 ASPHD2Q6ICH7 369 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 OR5AC2Q9NZP5 309 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 IGKV3D-11A0A0A0MRZ8 115 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 PQLC2LA1A4F0 135 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 MBNL2Q5VZF2 373 aaKnown RBP10.37□□□□□ -0.75
FN1-202ENST00000336916 MRPL18Q9H0U6 180 aaKnown RBP10.37□□□□□ -0.75
FN1-202ENST00000336916 FBXL7Q9UJT9 491 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 EPOPA6NHQ4 379 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 DNLZQ5SXM8 178 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 MIC13Q5XKP0 118 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 OR4D5Q8NGN0 318 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 CGB1A6NKQ9 187 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 TMEM14DPA8MWL7 114 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 TMEM136Q6ZRR5 245 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 GOLT1AQ6ZVE7 132 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 TPRX1Q8N7U7 411 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 GPR146Q96CH1 333 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 LCN2P80188 198 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 TLNRD1Q9H1K6 362 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 IL17BQ9UHF5 180 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
FN1-202ENST00000336916 FUT5Q11128 374 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 LINC01560Q8TB33 94 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 EAF1Q96JC9 268 aaPredicted RBP10.36□□□□□ -0.75
FN1-202ENST00000336916 P2RY4P51582 365 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 ANKHD1Q8IWZ3 2542 aaKnown RBP10.36□□□□□ -0.75
FN1-202ENST00000336916 CNTFRP26992 372 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 WDYHV1Q96HA8 205 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 LOC107984156A0A0G2JMH3 177 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 LINC00271P0C7V0 271 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 ARL17AQ8IVW1 177 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 C1QTNF4Q9BXJ3 329 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 ZNF257Q9Y2Q1 563 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 CD8AP01732 235 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 F2Z2F3 143 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 SMAD7O15105 426 aaKnown RBP10.36□□□□□ -0.75
FN1-202ENST00000336916 OR11H4Q8NGC9 324 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 TMEM133Q9H2Q1 129 aa10.36□□□□□ -0.75
FN1-202ENST00000336916 THBDP07204 575 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 ITLN2Q8WWU7 325 aaPredicted RBP10.35□□□□□ -0.75
FN1-202ENST00000336916 YAE1D1Q9NRH1 226 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 SIGLEC12Q96PQ1 595 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 CENPVL1A0A0U1RR11 272 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 TCRBV4S1A1TA0A5B7 111 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 PPBPP02775 128 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 SPACA3Q8IXA5 215 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 ZNRF1Q8ND25 227 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 WNT2P09544 360 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 ZNF414Q96IQ9 312 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 GLIPR1P48060 266 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 FAM74A4Q5TZK3 123 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 PLA2G10O15496 165 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 IGHV1-2P23083 117 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 TMEM187Q14656 261 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 CFAP161Q6P656 301 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 SPSB3Q6PJ21 355 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 RNF114Q9Y508 228 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 UCP1P25874 307 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 ZNF79Q15937 498 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 IFI27L2Q9H2X8 130 aa10.35□□□□□ -0.75
FN1-202ENST00000336916 TRGV11A0A075B6L2 103 aa10.34□□□□□ -0.75
FN1-202ENST00000336916 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
FN1-202ENST00000336916 TIAF1O95411 115 aa10.34□□□□□ -0.75
FN1-202ENST00000336916 MRPL14Q6P1L8 145 aaKnown RBP10.34□□□□□ -0.75
FN1-202ENST00000336916 AGRNO00468 2067 aa10.34□□□□□ -0.75
FN1-202ENST00000336916 ERVK11-1P61568 191 aa10.34□□□□□ -0.75
FN1-202ENST00000336916 TRBV7-1A0A0A6YYK4 115 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms