RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ZNF709Q8N972 641 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 PINX1Q96BK5 328 aaKnown RBP10.24□□□□□ -0.77
LIMK1-201ENST00000336180 RPUSD4Q96CM3 377 aaKnown RBP10.24□□□□□ -0.77
LIMK1-201ENST00000336180 HIPK2Q9H2X6 1198 aa10.24□□□□□ -0.77
LIMK1-201ENST00000336180 B9A039 149 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 SLC25A17O43808 307 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 HSPB1P04792 205 aaKnown RBP10.23□□□□□ -0.77
LIMK1-201ENST00000336180 SRP19P09132 144 aaKnown RBP10.23□□□□□ -0.77
LIMK1-201ENST00000336180 CD1BP29016 333 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 GNB1P62873 340 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 SPATA31B1PQ5VZV4 182 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 UBTD1Q9HAC8 227 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 FAM90A26D6RGX4 464 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 H3BQ15 152 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 J3QR06 171 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 THBS3P49746 956 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 RAB24Q969Q5 203 aa10.23□□□□□ -0.77
LIMK1-201ENST00000336180 SERTM2A0A1B0GWG4 89 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 J3KRW8 73 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 MDKP21741 143 aaPredicted RBP10.22□□□□□ -0.77
LIMK1-201ENST00000336180 VDAC2P45880 294 aaPredicted RBP10.22□□□□□ -0.77
LIMK1-201ENST00000336180 TMEM41BQ5BJD5 291 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 HEPN1Q6WQI6 88 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 ENY2Q9NPA8 101 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 KPTNQ9Y664 436 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 A0A1W2PN81 502 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 C15orf61A6NNL5 157 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 CHRNA7P36544 502 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 CDKN1BP46527 198 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 PAX5Q02548 391 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 ZNF429Q86V71 674 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 RAB39BQ96DA2 213 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 LPAR2Q9HBW0 351 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 A0A1W2PPQ1 181 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 IGHV2-5P01817 119 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 ARSJQ5FYB0 599 aaPredicted RBP10.22□□□□□ -0.77
LIMK1-201ENST00000336180 DIRC2Q96SL1 478 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 KIAA1456Q9P272 454 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 HILPDAQ9Y5L2 63 aa10.22□□□□□ -0.77
LIMK1-201ENST00000336180 COLCA2A8K830 154 aa10.21□□□□□ -0.77
LIMK1-201ENST00000336180 RTL8BQ17RB0 113 aa10.21□□□□□ -0.77
LIMK1-201ENST00000336180 HCP5Q6MZN7 132 aa10.21□□□□□ -0.77
LIMK1-201ENST00000336180 OR51G1Q8NGK1 321 aa10.21□□□□□ -0.77
LIMK1-201ENST00000336180 ZNF462Q96JM2 2506 aa10.21□□□□□ -0.77
LIMK1-201ENST00000336180 IGHV1-8P0DP01 117 aa10.21□□□□□ -0.78
LIMK1-201ENST00000336180 IGFBP2P18065 325 aa10.21□□□□□ -0.78
LIMK1-201ENST00000336180 NPY1RP25929 384 aa10.21□□□□□ -0.78
LIMK1-201ENST00000336180 S100A2P29034 98 aa10.21□□□□□ -0.78
LIMK1-201ENST00000336180 TREML4Q6UXN2 200 aa10.21□□□□□ -0.78
LIMK1-201ENST00000336180 MGST2Q99735 147 aa10.21□□□□□ -0.78
LIMK1-201ENST00000336180 SNHG12Q9BXW3 62 aa10.21□□□□□ -0.78
LIMK1-201ENST00000336180 TEX50A0A1B0GTY4 177 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 H0YJW9 148 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 PAGE4O60829 102 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 PRB1P04280 392 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 SSBP2P81877 361 aaPredicted RBP10.2□□□□□ -0.78
LIMK1-201ENST00000336180 C11orf42Q8N5U0 333 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 NECAP1Q8NC96 275 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 OR10D4PQ8NGN7 298 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 FAM216AQ8WUB2 273 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 ACY3Q96HD9 319 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 PACRGQ96M98 296 aaPredicted RBP10.2□□□□□ -0.78
LIMK1-201ENST00000336180 CIB3Q96Q77 187 aaPredicted RBP10.2□□□□□ -0.78
LIMK1-201ENST00000336180 DOK5Q9P104 306 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 LOC102723971A0A1B0GUV8 181 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
LIMK1-201ENST00000336180 DLK1P80370 383 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 PDLIM3Q53GG5 364 aaPredicted RBP10.2□□□□□ -0.78
LIMK1-201ENST00000336180 CST9LP1Q5W188 147 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 SMIM15Q7Z3B0 74 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 OR2T6Q8NHC8 308 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 NUDT11Q96G61 164 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 PLEKHA3Q9HB20 300 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 PPIAL4CA0A0B4J2A2 164 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 PGPEP1LA6NFU8 196 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 AP4M1O00189 453 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 FOXH1O75593 365 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 PPIAL4GP0DN37 164 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 RUSC1-AS1Q66K80 236 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 OR4F5Q8NH21 305 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 CORO2AQ92828 525 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 FLYWCH2Q96CP2 140 aaKnown RBP10.2□□□□□ -0.78
LIMK1-201ENST00000336180 C1orf159Q96HA4 380 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 OR4F4Q96R69 305 aa10.2□□□□□ -0.78
LIMK1-201ENST00000336180 TNFRSF13BO14836 293 aaPredicted RBP10.19□□□□□ -0.78
LIMK1-201ENST00000336180 APOA2P02652 100 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 BCL2P10415 239 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 TMEM155Q4W5P6 130 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 FBLN7Q53RD9 439 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 LDLRAD2Q5SZI1 272 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 OR9G1Q8NH87 305 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 NABP2Q9BQ15 211 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 LRRK2Q5S007 2527 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 IFITM10A6NMD0 228 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 HRASP01112 189 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 Q8N7P7 452 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 LFNGQ8NES3 379 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 USP24Q9UPU5 2620 aa10.19□□□□□ -0.78
LIMK1-201ENST00000336180 UPK2O00526 184 aa10.18□□□□□ -0.78
LIMK1-201ENST00000336180 KBTBD11O94819 623 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms