RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SHANK1Q9Y566 2161 aa12.49□□□□□ -0.41
C9orf47-201ENST00000334490 MPTX1A8MV57 137 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 IGFBP2P18065 325 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 TWIST1Q15672 202 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 HEPN1Q6WQI6 88 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 TSPOP30536 169 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 MAS1LP35410 378 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 GOLT1AQ6ZVE7 132 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 DMRTA2Q96SC8 542 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 FUT9Q9Y231 359 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 FHITP49789 147 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 SNRPEP62304 92 aaKnown RBP12.48□□□□□ -0.41
C9orf47-201ENST00000334490 RPRMQ9NS64 109 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 E7EQL1 145 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 EGR1P18146 543 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
C9orf47-201ENST00000334490 TMEM200BQ69YZ2 307 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 TNFRSF14Q92956 283 aa12.48□□□□□ -0.41
C9orf47-201ENST00000334490 OTX1P32242 354 aaPredicted RBP12.47□□□□□ -0.41
C9orf47-201ENST00000334490 CD177Q8N6Q3 437 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 M0R2Z0 102 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 RAMP3O60896 148 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 PLAURQ03405 335 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 PSMG3Q9BT73 122 aaPredicted RBP12.47□□□□□ -0.41
C9orf47-201ENST00000334490 GGACTQ9BVM4 153 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 NPCDR1Q9BY65 106 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 DOCK10Q96BY6 2186 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 VDAC2P45880 294 aaPredicted RBP12.47□□□□□ -0.41
C9orf47-201ENST00000334490 HGFACQ04756 655 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 FAM169BQ8N8A8 192 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 CACNG8Q8WXS5 425 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 KIAA1671Q9BY89 1806 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 HEATR5AQ86XA9 2040 aa12.47□□□□□ -0.41
C9orf47-201ENST00000334490 IGHV2-26A0A0B4J1V2 119 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 TEX50A0A1B0GTY4 177 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 ETV2O00321 342 aaPredicted RBP12.46□□□□□ -0.41
C9orf47-201ENST00000334490 CD81P60033 236 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 CX3CL1P78423 397 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 C11orf44Q8N8P7 122 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 CLDND2Q8NHS1 167 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.41
C9orf47-201ENST00000334490 VAMP8Q9BV40 100 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 OTOGLQ3ZCN5 2332 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 GCHFRP30047 84 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 ICAM4Q14773 271 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 ZNF324BQ6AW86 544 aaPredicted RBP12.46□□□□□ -0.41
C9orf47-201ENST00000334490 RNASEH2CQ8TDP1 164 aaKnown RBP12.46□□□□□ -0.41
C9orf47-201ENST00000334490 MLNRO43193 412 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 RBFOX2O43251 390 aaKnown RBP eCLIP12.46□□□□□ -0.41
C9orf47-201ENST00000334490 APCSP02743 223 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 NBEAP1P0C6P0 100 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 IGHV1-8P0DP01 117 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 COL8A2P25067 703 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 NHLRC3Q5JS37 347 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 SYT8Q8NBV8 401 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 PHLDA3Q9Y5J5 127 aa12.46□□□□□ -0.41
C9orf47-201ENST00000334490 C2orf68Q2NKX9 166 aa12.46□□□□□ -0.42
C9orf47-201ENST00000334490 FOXL2NBQ6ZUU3 175 aa12.46□□□□□ -0.42
C9orf47-201ENST00000334490 BPESC1Q9GZL8 116 aa12.46□□□□□ -0.42
C9orf47-201ENST00000334490 LINC00527Q9UJ94 153 aa12.46□□□□□ -0.42
C9orf47-201ENST00000334490 WNT2P09544 360 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 DANCRP0C864 163 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 TMEM42Q69YG0 159 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 TUBA4BQ9H853 241 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 KLRD1Q13241 179 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 VMO1Q7Z5L0 202 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 FOXI3A8MTJ6 420 aaPredicted RBP12.45□□□□□ -0.42
C9orf47-201ENST00000334490 GATA2P23769 480 aaPredicted RBP12.45□□□□□ -0.42
C9orf47-201ENST00000334490 Q6ZN92 141 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 SCN8AQ9UQD0 1980 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 C15orf61A6NNL5 157 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 RNF224P0DH78 156 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 TFF3Q07654 80 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 TEX45Q8NA69 505 aa12.45□□□□□ -0.42
C9orf47-201ENST00000334490 WT1P19544 449 aaPredicted RBP12.44□□□□□ -0.42
C9orf47-201ENST00000334490 FAM166AQ6J272 317 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 BRD3OSQ6XYD6 125 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 ZNF525Q8N782 197 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 AP4M1O00189 453 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 WISP1O95388 367 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 Q1RN00 199 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 HELZP42694 1942 aaKnown RBP12.44□□□□□ -0.42
C9orf47-201ENST00000334490 CEACAM8P31997 349 aaPredicted RBP12.44□□□□□ -0.42
C9orf47-201ENST00000334490 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 RCC1LQ96I51 464 aaKnown RBP12.44□□□□□ -0.42
C9orf47-201ENST00000334490 RARRES2Q99969 163 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 ANOS1P23352 680 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 NUTF2P61970 127 aaKnown RBP12.44□□□□□ -0.42
C9orf47-201ENST00000334490 RHOGP84095 191 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 FHL1Q13642 323 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 RNF144BQ7Z419 303 aa12.44□□□□□ -0.42
C9orf47-201ENST00000334490 TNFSF13O75888 250 aa12.43□□□□□ -0.42
C9orf47-201ENST00000334490 EIF4E3Q8N5X7 224 aaKnown RBP12.43□□□□□ -0.42
C9orf47-201ENST00000334490 G0S2P27469 103 aa12.43□□□□□ -0.42
C9orf47-201ENST00000334490 TMEM219Q86XT9 240 aa12.43□□□□□ -0.42
C9orf47-201ENST00000334490 ITLN2Q8WWU7 325 aaPredicted RBP12.43□□□□□ -0.42
C9orf47-201ENST00000334490 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms