RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 OR5M8Q8NGP6 311 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 RNASE11Q8TAA1 199 aaKnown RBP13.05□□□□□ -0.32
SHOX-201ENST00000334060 NOL4LQ96MY1 436 aaPredicted RBP13.05□□□□□ -0.32
SHOX-201ENST00000334060 CRYBA1P05813 215 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 SPP1P10451 314 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 EGR2P11161 476 aaPredicted RBP13.05□□□□□ -0.32
SHOX-201ENST00000334060 LGALS7P47929 136 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 CX3CL1P78423 397 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 PRSS8Q16651 343 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 CXorf66Q5JRM2 361 aaPredicted RBP13.05□□□□□ -0.32
SHOX-201ENST00000334060 INO80EQ8NBZ0 244 aaPredicted RBP13.05□□□□□ -0.32
SHOX-201ENST00000334060 OR10W1Q8NGF6 305 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
SHOX-201ENST00000334060 MMP24Q9Y5R2 645 aa13.05□□□□□ -0.32
SHOX-201ENST00000334060 C5orf52A6NGY3 159 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 HRASP01112 189 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 TPT1P13693 172 aaKnown RBP13.04□□□□□ -0.32
SHOX-201ENST00000334060 VDAC1P21796 283 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 TNXAQ16473 311 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 TCTEX1D1Q8N7M0 179 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 OR5R1Q8NH85 324 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 TMEM167AQ8TBQ9 72 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 ZNF471Q9BX82 626 aaPredicted RBP13.04□□□□□ -0.32
SHOX-201ENST00000334060 MAGT1Q9H0U3 335 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 TUBA4BQ9H853 241 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 ZNF702PQ9H963 129 aa13.04□□□□□ -0.32
SHOX-201ENST00000334060 FAM212BQ9NTI7 297 aaPredicted RBP13.04□□□□□ -0.32
SHOX-201ENST00000334060 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 ST8SIA3O43173 380 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 ERVK-16P61578 105 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 VMA21Q3ZAQ7 101 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 EIF5AL1Q6IS14 154 aaKnown RBP13.03□□□□□ -0.32
SHOX-201ENST00000334060 ZNF418Q8TF45 676 aaPredicted RBP13.03□□□□□ -0.32
SHOX-201ENST00000334060 BET1LQ9NYM9 111 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 BTBD17A6NE02 478 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 G3V318 75 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 REG1AP05451 166 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 CYCSP99999 105 aaKnown RBP13.03□□□□□ -0.32
SHOX-201ENST00000334060 ASPHD1Q5U4P2 390 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 IL22RA2Q969J5 263 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 RRNAD1Q96FB5 475 aaKnown RBP13.03□□□□□ -0.32
SHOX-201ENST00000334060 GSKIPQ9P0R6 139 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 KIAA1456Q9P272 454 aa13.03□□□□□ -0.32
SHOX-201ENST00000334060 TEX50A0A1B0GTY4 177 aa13.02□□□□□ -0.32
SHOX-201ENST00000334060 ATP6V0E1O15342 81 aa13.02□□□□□ -0.32
SHOX-201ENST00000334060 KCNAB3O43448 404 aa13.02□□□□□ -0.32
SHOX-201ENST00000334060 IAH1Q2TAA2 248 aaPredicted RBP13.02□□□□□ -0.32
SHOX-201ENST00000334060 Q6ZSV7 163 aa13.02□□□□□ -0.32
SHOX-201ENST00000334060 TEX45Q8NA69 505 aa13.02□□□□□ -0.32
SHOX-201ENST00000334060 RASL11BQ9BPW5 248 aa13.02□□□□□ -0.32
SHOX-201ENST00000334060 HINT2Q9BX68 163 aa13.02□□□□□ -0.32
SHOX-201ENST00000334060 C5orf51A6NDU8 294 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 C15orf61A6NNL5 157 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 PITX3O75364 302 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 AREGP15514 252 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 RPL8P62917 257 aaKnown RBP13.01□□□□□ -0.33
SHOX-201ENST00000334060 OR1S2Q8NGQ3 325 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 RXFP4Q8TDU9 374 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 LSM10Q969L4 123 aaKnown RBP13.01□□□□□ -0.33
SHOX-201ENST00000334060 RNF5Q99942 180 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 TMEM14BQ9NUH8 114 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 C1RLQ9NZP8 487 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 DMRT1Q9Y5R6 373 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 WSB1Q9Y6I7 421 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 TCF21O43680 179 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 RBMXL2O75526 392 aaKnown RBP13.01□□□□□ -0.33
SHOX-201ENST00000334060 SCGB1D2O95969 90 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 MT-ND4LP03901 98 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 RNASE1P07998 156 aaKnown RBP13.01□□□□□ -0.33
SHOX-201ENST00000334060 CD81P60033 236 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 FXYD3Q14802 87 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 LRRC37A5PQ49AS3 106 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 LCNL1Q6ZST4 164 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 FOXRED2Q8IWF2 684 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 OR4D5Q8NGN0 318 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 NIT2Q9NQR4 276 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 PARP11Q9NR21 331 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 UQCC1Q9NVA1 299 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 PITPNC1Q9UKF7 332 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 OR51B2Q9Y5P1 312 aa13.01□□□□□ -0.33
SHOX-201ENST00000334060 TEX22C9J3V5 150 aa13□□□□□ -0.33
SHOX-201ENST00000334060 HLA-DRB1P01911 266 aa13□□□□□ -0.33
SHOX-201ENST00000334060 PRH1P02810 166 aa13□□□□□ -0.33
SHOX-201ENST00000334060 SRPXP78539 464 aa13□□□□□ -0.33
SHOX-201ENST00000334060 TMEM88Q6PEY1 159 aa13□□□□□ -0.33
SHOX-201ENST00000334060 STX12Q86Y82 276 aa13□□□□□ -0.33
SHOX-201ENST00000334060 SRSF12Q8WXF0 261 aaKnown RBP13□□□□□ -0.33
SHOX-201ENST00000334060 RAB18Q9NP72 206 aa13□□□□□ -0.33
SHOX-201ENST00000334060 TMED3Q9Y3Q3 217 aa13□□□□□ -0.33
SHOX-201ENST00000334060 MSGN1A6NI15 193 aa13□□□□□ -0.33
SHOX-201ENST00000334060 TMEM50AO95807 157 aa13□□□□□ -0.33
SHOX-201ENST00000334060 COMPP49747 757 aaPredicted RBP13□□□□□ -0.33
SHOX-201ENST00000334060 IL15RAQ13261 267 aa13□□□□□ -0.33
SHOX-201ENST00000334060 LFNGQ8NES3 379 aa13□□□□□ -0.33
SHOX-201ENST00000334060 OR4A16Q8NH70 328 aa13□□□□□ -0.33
SHOX-201ENST00000334060 TMPRSS5Q9H3S3 457 aa13□□□□□ -0.33
SHOX-201ENST00000334060 CLDN34H7C241 214 aa12.99□□□□□ -0.33
SHOX-201ENST00000334060 SOX15O60248 233 aa12.99□□□□□ -0.33
SHOX-201ENST00000334060 MBPP02686 304 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms