RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PLPP3O14495 311 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 MLNRO43193 412 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 ZNF688P0C7X2 276 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 GABRG2P18507 467 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 RPL31P62899 125 aaKnown RBP8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 GPR146Q96CH1 333 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 MS4A5Q9H3V2 200 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 FSCN3Q9NQT6 498 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 NHP2Q9NX24 153 aaKnown RBP8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 TNFSF14O43557 240 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 RTN4RL2Q86UN3 420 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 HS3ST3B1Q9Y662 390 aa8.9□□□□□ -0.99
SPTBN1-201ENST00000333896 SF3B6Q9Y3B4 125 aaKnown RBP8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 GREM1O60565 184 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 SRD5A2P31213 254 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 SCNM1Q9BWG6 230 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 ZFYVE26Q68DK2 2539 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 GAGE12HA6NDE8 117 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 DPM2O94777 84 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 CNRIP1Q96F85 164 aaPredicted RBP8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 DIRC2Q96SL1 478 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 CCL27Q9Y4X3 112 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 TNFRSF18Q9Y5U5 241 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 TRAV2A0A0B4J234 112 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 STPG3Q8N7X2 389 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 SUMO4Q6EEV6 95 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 ZNF645Q8N7E2 425 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 SPATA25Q9BR10 227 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 SNHG12Q9BXW3 62 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 TET2Q6N021 2002 aaPredicted RBP8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 SHISA7A6NL88 538 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 RPL36A-HNRNPH2H7BZ11 118 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 ADMP35318 185 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 ATXN8Q156A1 80 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 GOLT1AQ6ZVE7 132 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 GNRHR2Q96P88 292 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 FNDC1Q4ZHG4 1894 aaPredicted RBP8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 PGPA6NDG6 321 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 H0Y8X5 98 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 KLKB1P03952 638 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 LGALS1P09382 135 aaKnown RBP8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 GPR6P46095 362 aaPredicted RBP8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 SLC25A38Q96DW6 304 aa8.89□□□□□ -0.99
SPTBN1-201ENST00000333896 K7EP13 123 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 IGKV3-20P01619 116 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 IGLV3-27P01718 113 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 PPBPP02775 128 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 AZU1P20160 251 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 PLNP26678 52 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 EFNB2P52799 333 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 C1orf122Q6ZSJ8 110 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 PATE1Q8WXA2 126 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 CD160O95971 181 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 C10orf91Q5T1B1 145 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 GAGE12JA6NER3 117 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 GAGE7O76087 117 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 GAGE12FP0CL80 117 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 GAGE12GP0CL81 117 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 GAGE12IP0CL82 117 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 GAGE4Q13068 117 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 DUX5Q96PT3 197 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 GGTLC1Q9BX51 225 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 TMEM52BQ4KMG9 183 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 WIPI1Q5MNZ9 446 aaPredicted RBP8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 FAM159AQ6UWV7 190 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 GPBAR1Q8TDU6 330 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 FCN3O75636 299 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 MS4A4AQ96JQ5 239 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 FOXQ1Q9C009 403 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 DTX4Q9Y2E6 619 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 TRBV5-7A0A0A0MS05 114 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 NPSP0C0P6 89 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 CTLA4P16410 223 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 CAPZBP47756 277 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 PPDPFLQ8WWR9 84 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 RAX2Q96IS3 184 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 J3KT08 172 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 RPL23P62829 140 aaKnown RBP8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 RPL32P62910 135 aaKnown RBP8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 TEX38Q6PEX7 206 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 ZNF793Q6ZN11 406 aa8.88□□□□□ -0.99
SPTBN1-201ENST00000333896 SYNGR3O43761 229 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 ADAMTSL5Q6ZMM2 481 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 MESP1Q9BRJ9 268 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 OSTCQ9NRP0 149 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 C9JCJ5 164 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 GFI1BQ5VTD9 330 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 PRRC2AP48634 2157 aaKnown RBP8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 C9orf118A6NHY6 69 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 LHX9Q9NQ69 397 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 MRPS18BQ9Y676 258 aaKnown RBP8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 RNF182Q8N6D2 247 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 CACNA1AO00555 2505 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 CLDN14O95500 239 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 IGHV2-5P01817 119 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 SPEM1Q8N4L4 309 aa8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.87□□□□□ -0.99
SPTBN1-201ENST00000333896 CEACAM4O75871 244 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms