RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 RNASEH2CQ8TDP1 164 aaKnown RBP11.25□□□□□ -0.61
TRAIP-201ENST00000331456 SSMEM1Q8WWF3 244 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 SLC35E1Q96K37 410 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 NIPSNAP3BQ9BS92 247 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 TPSG1Q9NRR2 321 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 FAM208BQ5VWN6 2430 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 E7EUB6 86 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 H3BQ15 152 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 OVOL3O00110 214 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 EIF3GO75821 320 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAIP-201ENST00000331456 CRYGBP07316 175 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 ATF4P18848 351 aaPredicted RBP11.25□□□□□ -0.61
TRAIP-201ENST00000331456 RPL27AP46776 148 aaKnown RBP11.25□□□□□ -0.61
TRAIP-201ENST00000331456 TNXAQ16473 311 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 TMEM249Q2WGJ8 235 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 C10orf55Q5SWW7 151 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 STPG3Q8N7X2 389 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 C20orf24Q9BUV8 137 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 METTL1Q9UBP6 276 aaKnown RBP11.25□□□□□ -0.61
TRAIP-201ENST00000331456 SIGLEC9Q9Y336 463 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 CGB1A6NKQ9 187 aa11.24□□□□□ -0.61
TRAIP-201ENST00000331456 ODF3BA8MYP8 253 aa11.24□□□□□ -0.61
TRAIP-201ENST00000331456 MEF2BQ02080 365 aaPredicted RBP11.24□□□□□ -0.61
TRAIP-201ENST00000331456 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
TRAIP-201ENST00000331456 GAMTQ14353 236 aa11.24□□□□□ -0.61
TRAIP-201ENST00000331456 GCSAMLQ5JQS6 135 aa11.24□□□□□ -0.61
TRAIP-201ENST00000331456 TMPRSS5Q9H3S3 457 aa11.24□□□□□ -0.61
TRAIP-201ENST00000331456 SMG1Q96Q15 3661 aaKnown RBP11.23□□□□□ -0.61
TRAIP-201ENST00000331456 TIMM23O14925 209 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 NDUFS6O75380 124 aaKnown RBP11.23□□□□□ -0.61
TRAIP-201ENST00000331456 CNTFRP26992 372 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 RHOBP62745 196 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 KLRD1Q13241 179 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 SLC16A13Q7RTY0 426 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 VMO1Q7Z5L0 202 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 PPP1R27Q86WC6 154 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 TVP23CQ96ET8 276 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
TRAIP-201ENST00000331456 PDLIM4P50479 330 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 PRR20EP86478 221 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 PRR20CP86479 221 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 PRR20DP86480 221 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 PRR20BP86481 221 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 PRR20AP86496 221 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 PLGLAQ15195 96 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 HCP5Q6MZN7 132 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 CCDC144NLQ6NUI1 221 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 SLC45A2Q9UMX9 530 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 HILPDAQ9Y5L2 63 aa11.23□□□□□ -0.61
TRAIP-201ENST00000331456 VENTXO95231 258 aa11.22□□□□□ -0.61
TRAIP-201ENST00000331456 CXorf1O96002 111 aa11.22□□□□□ -0.61
TRAIP-201ENST00000331456 MT-CO2P00403 227 aa11.22□□□□□ -0.61
TRAIP-201ENST00000331456 COMPP49747 757 aaPredicted RBP11.22□□□□□ -0.61
TRAIP-201ENST00000331456 LGALS4P56470 323 aa11.22□□□□□ -0.61
TRAIP-201ENST00000331456 LCN2P80188 198 aa11.22□□□□□ -0.61
TRAIP-201ENST00000331456 FAM90A2PQ658T7 463 aa11.22□□□□□ -0.61
TRAIP-201ENST00000331456 NANPQ8TBE9 248 aa11.22□□□□□ -0.61
TRAIP-201ENST00000331456 SPTBN1Q01082 2364 aaKnown RBP11.22□□□□□ -0.61
TRAIP-201ENST00000331456 ZFYVE26Q68DK2 2539 aa11.22□□□□□ -0.61
TRAIP-201ENST00000331456 IGHV2-70DA0A0C4DH43 119 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 OOSP1A8MZH6 123 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 TMEM250H0YL14 139 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 STAG3L2P0CL84 134 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 STAG3L3P0CL85 134 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 DEFA4P12838 97 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 OR10J1P30954 320 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 AKR1C3P42330 323 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 GNB1P62873 340 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 MINOS1Q5TGZ0 78 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 C15orf54Q8N8G6 183 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 BPESC1Q9GZL8 116 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 FBXL15Q9H469 300 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 TUBA4BQ9H853 241 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 MINOS1-NBL1R4GNA1 71 aa11.21□□□□□ -0.61
TRAIP-201ENST00000331456 IGLC7A0M8Q6 106 aa11.21□□□□□ -0.62
TRAIP-201ENST00000331456 PAGE4O60829 102 aa11.21□□□□□ -0.62
TRAIP-201ENST00000331456 MOSP00540 346 aa11.21□□□□□ -0.62
TRAIP-201ENST00000331456 CD81P60033 236 aa11.21□□□□□ -0.62
TRAIP-201ENST00000331456 LDLRAD2Q5SZI1 272 aa11.21□□□□□ -0.62
TRAIP-201ENST00000331456 ZNF114Q8NC26 417 aa11.21□□□□□ -0.62
TRAIP-201ENST00000331456 ACY3Q96HD9 319 aa11.21□□□□□ -0.62
TRAIP-201ENST00000331456 CCL19Q99731 98 aa11.21□□□□□ -0.62
TRAIP-201ENST00000331456 KLF2Q9Y5W3 355 aaPredicted RBP11.21□□□□□ -0.62
TRAIP-201ENST00000331456 TNCP24821 2201 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 A0A1W2PRD5 423 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 A0A1W2PRF3 423 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 A0A1W2PRM7 423 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 IGHV4-39P01824 125 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 LINC00869P0C866 280 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 PAX6P26367 422 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 LMO4P61968 165 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 PNRC1Q12796 327 aaPredicted RBP11.2□□□□□ -0.62
TRAIP-201ENST00000331456 HABP2Q14520 560 aaPredicted RBP11.2□□□□□ -0.62
TRAIP-201ENST00000331456 MMDQ15546 238 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 MLANAQ16655 118 aa11.2□□□□□ -0.62
TRAIP-201ENST00000331456 LHFPL4Q7Z7J7 247 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms