RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 FOXI3A8MTJ6 420 aaPredicted RBP13.22□□□□□ -0.29
SYNM-201ENST00000328642 YPEL1O60688 119 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 KIAA1644Q3SXP7 199 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 RPP25LQ8N5L8 163 aaKnown RBP13.22□□□□□ -0.29
SYNM-201ENST00000328642 BORCS7Q96B45 105 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 YPEL2Q96QA6 119 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 CHODLQ9H9P2 273 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 LOC105371242A0A075B767 164 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 ZNF134P52741 427 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 POM121Q96HA1 1249 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 CLEC7AQ9BXN2 247 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 LINC00527Q9UJ94 153 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 IER3P46695 156 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 CRIP3Q6Q6R5 217 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 ZNF596Q8TC21 504 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 VKORC1Q9BQB6 163 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 SSBP3Q9BWW4 388 aaPredicted RBP13.22□□□□□ -0.29
SYNM-201ENST00000328642 TOLLIPQ9H0E2 274 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 GSX1Q9H4S2 264 aaPredicted RBP13.22□□□□□ -0.29
SYNM-201ENST00000328642 PPP1R14DQ9NXH3 145 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 CXorf1O96002 111 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 IL6RP08887 468 aaPredicted RBP13.22□□□□□ -0.29
SYNM-201ENST00000328642 ACAA1P09110 424 aaPredicted RBP13.22□□□□□ -0.29
SYNM-201ENST00000328642 SSX7Q7RTT5 188 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 PDPNQ86YL7 162 aa13.22□□□□□ -0.29
SYNM-201ENST00000328642 KLF17Q5JT82 389 aaPredicted RBP13.21□□□□□ -0.29
SYNM-201ENST00000328642 PQLC2Q6ZP29 291 aa13.21□□□□□ -0.29
SYNM-201ENST00000328642 PKD1L2Q7Z442 2459 aa13.21□□□□□ -0.29
SYNM-201ENST00000328642 PAX5Q02548 391 aa13.21□□□□□ -0.29
SYNM-201ENST00000328642 ZNF672Q499Z4 452 aaPredicted RBP13.21□□□□□ -0.29
SYNM-201ENST00000328642 Q6ZPA2 131 aa13.21□□□□□ -0.29
SYNM-201ENST00000328642 MIR17HGQ75NE6 70 aa13.21□□□□□ -0.29
SYNM-201ENST00000328642 ZNF383Q8NA42 475 aa13.21□□□□□ -0.29
SYNM-201ENST00000328642 AMMECR1Q9Y4X0 333 aaPredicted RBP13.21□□□□□ -0.29
SYNM-201ENST00000328642 K7ENP7 123 aa13.21□□□□□ -0.3
SYNM-201ENST00000328642 CSN3P07498 182 aa13.21□□□□□ -0.3
SYNM-201ENST00000328642 CT45A10P0DMU9 189 aa13.21□□□□□ -0.3
SYNM-201ENST00000328642 ZNF137PP52743 207 aa13.21□□□□□ -0.3
SYNM-201ENST00000328642 PMS2P11Q13670 270 aa13.21□□□□□ -0.3
SYNM-201ENST00000328642 PERPQ96FX8 193 aa13.21□□□□□ -0.3
SYNM-201ENST00000328642 MANBALQ9NQG1 85 aa13.21□□□□□ -0.3
SYNM-201ENST00000328642 LINC00312Q9Y6C7 94 aa13.21□□□□□ -0.3
SYNM-201ENST00000328642 SLC17A3O00476 420 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 IGKV1D-33P01593 117 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 IGKV1-33P01594 117 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 ERVK11-1P61568 191 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 OR5I1Q13606 314 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 C11orf53Q8IXP5 236 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 PAXXQ9BUH6 204 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 ATP5J2P56134 94 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 KRTDAPP60985 99 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 DIAPH2-AS1Q14236 149 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 MST1LQ2TV78 715 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 GAFA1Q96PS6 74 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 RPUSD1Q9UJJ7 312 aaKnown RBP13.2□□□□□ -0.3
SYNM-201ENST00000328642 ANAPC10Q9UM13 185 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 IGHV3-66A0A0C4DH42 116 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 AP4M1O00189 453 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 NDUFS7O75251 213 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 LIPFP07098 398 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 WNT2P09544 360 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 GNLYP22749 145 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 SPATA31B1PQ5VZV4 182 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 C19orf35Q6ZS72 473 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 CLDND2Q8NHS1 167 aa13.2□□□□□ -0.3
SYNM-201ENST00000328642 MBNL3Q9NUK0 354 aaKnown RBP13.2□□□□□ -0.3
SYNM-201ENST00000328642 ZNF462Q96JM2 2506 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 PGPA6NDG6 321 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 ZNF207O43670 478 aaKnown RBP13.19□□□□□ -0.3
SYNM-201ENST00000328642 CSN1S1P47710 185 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 ICAM4Q14773 271 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 TCEAL7Q9BRU2 100 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 GPR61Q9BZJ8 451 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 LOC102723971A0A1B0GUV8 181 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 TMEM178BH3BS89 294 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 RAB4AP20338 218 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 PPOXP50336 477 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 ATG2AQ2TAZ0 1938 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 SCO2A0A1W2PP80 73 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 SH2D7A6NKC9 451 aaPredicted RBP13.19□□□□□ -0.3
SYNM-201ENST00000328642 MC5RP33032 325 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 PAX9P55771 341 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 MMD2Q8IY49 270 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 TCTEX1D1Q8N7M0 179 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 HSPB7Q9UBY9 170 aa13.19□□□□□ -0.3
SYNM-201ENST00000328642 USF1P22415 310 aaPredicted RBP13.18□□□□□ -0.3
SYNM-201ENST00000328642 NUBP1P53384 320 aa13.18□□□□□ -0.3
SYNM-201ENST00000328642 KDF1Q8NAX2 398 aaPredicted RBP13.18□□□□□ -0.3
SYNM-201ENST00000328642 CHEK1O14757 476 aa13.18□□□□□ -0.3
SYNM-201ENST00000328642 PNRC1Q12796 327 aaPredicted RBP13.18□□□□□ -0.3
SYNM-201ENST00000328642 TMEM186Q96B77 213 aa13.18□□□□□ -0.3
SYNM-201ENST00000328642 GATCO43716 136 aaKnown RBP13.18□□□□□ -0.3
SYNM-201ENST00000328642 CTRB1P17538 263 aa13.18□□□□□ -0.3
SYNM-201ENST00000328642 FCGR2BP31994 310 aaPredicted RBP13.18□□□□□ -0.3
SYNM-201ENST00000328642 NHLH1Q02575 133 aa13.18□□□□□ -0.3
SYNM-201ENST00000328642 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
SYNM-201ENST00000328642 RBM14Q96PK6 669 aaKnown RBP13.18□□□□□ -0.3
SYNM-201ENST00000328642 TRAV5A0A0B4J249 113 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms