RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 BAXQ07812 192 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 TMEM267Q0VDI3 215 aaPredicted RBP8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 STX12Q86Y82 276 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 ABHD5Q8WTS1 349 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 ZC4H2Q9NQZ6 224 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 FBXO7Q9Y3I1 522 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 HSPB11Q9Y547 144 aa8.1□□□□□ -1.11
VIPAS39-201ENST00000327028 SCAF4O95104 1147 aaKnown RBP8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 EGR2P11161 476 aaPredicted RBP8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 AREGP15514 252 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 NPY1RP25929 384 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 SULT1A1P50225 295 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 AP2S1P53680 142 aaPredicted RBP8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 ZNF114Q8NC26 417 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 TMEM170AQ8WVE7 144 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 PARP11Q9NR21 331 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 CLDN34H7C241 214 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 ATP6V0E1O15342 81 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 OR8U8P0C7N1 319 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 METTL15P1P0C7V9 234 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 RNASE2P10153 161 aaKnown RBP8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 C2orf83Q53S99 150 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 IQCF2Q8IXL9 164 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 STPG2Q8N412 459 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 SGMS2Q8NHU3 365 aa8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 FAM103A1Q9BTL3 118 aaKnown RBP8.09□□□□□ -1.11
VIPAS39-201ENST00000327028 IGHG2P01859 326 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 SNCAP37840 140 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 RAB11AP62491 216 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 ASPHD1Q5U4P2 390 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 TMUB2Q71RG4 321 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 ZNF418Q8TF45 676 aaPredicted RBP8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 NPIPB5A8MRT5 1133 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 CST7O76096 145 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 REG1AP05451 166 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 APELAP0DMC3 54 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 C4BPBP20851 252 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 S100A11P31949 105 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 SUB1P53999 127 aaKnown RBP eCLIP8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 C9orf152Q5JTZ5 239 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 SLC35E3Q7Z769 313 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 HAPLN4Q86UW8 402 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 BSCL2Q96G97 398 aaPredicted RBP8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 P2RX4Q99571 388 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 NPFFR1Q9GZQ6 430 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 ARL6Q9H0F7 186 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 ESM1Q9NQ30 184 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 FBXL17Q9UF56 701 aa8.08□□□□□ -1.12
VIPAS39-201ENST00000327028 MAST4O15021 2626 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 PMS2P5A8MQ11 134 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 BCL2L11O43521 198 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 FAM157CP0CG43 387 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 CTRB1P17538 263 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 HILS1P60008 231 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 BLCAPP62952 87 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 NHLH2Q02577 135 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 SMUG1Q53HV7 270 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 PVRIGQ6DKI7 326 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 CTRB2Q6GPI1 263 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 TTC9CQ8N5M4 171 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 OR1P1Q8NH06 330 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 TMEM68Q96MH6 324 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 DUX5Q96PT3 197 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 ZNF580Q9UK33 172 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 F11RQ9Y624 299 aaKnown RBP8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 LINC01548A6NM66 108 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 CRLF1O75462 422 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 IGF1P05019 195 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 CRYGCP07315 174 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 HBG1P69891 147 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 HBG2P69892 147 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 ARL16Q0P5N6 197 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 C19orf54Q5BKX5 351 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 OR8G2PQ6IF36 304 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 ETV3LQ6ZN32 361 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 TMEM217Q8N7C4 229 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 LFNGQ8NES3 379 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 OR1S2Q8NGQ3 325 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 PRSS22Q9GZN4 317 aa8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 FN1P02751 2386 aaKnown RBP8.07□□□□□ -1.12
VIPAS39-201ENST00000327028 KANTRA0A1W2PQU2 76 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 PRSS46E5RG02 174 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 TAAR5O14804 337 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 FBXO24O75426 580 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 IFNA4P05014 189 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 SLC38A11Q08AI6 406 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 OPCMLQ14982 345 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 ECSCRQ19T08 205 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 AKIRIN2Q53H80 203 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 OR10P1Q8NGE3 313 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 OR1L6Q8NGR2 347 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 FAM110DQ8TAY7 271 aaPredicted RBP8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 RNASEH2CQ8TDP1 164 aaKnown RBP8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 BOLA1Q9Y3E2 137 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 RNASE1P07998 156 aaKnown RBP8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 UNQ5815/PRO19632Q6UWF5 114 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 Q6ZS46 218 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 C19orf35Q6ZS72 473 aa8.06□□□□□ -1.12
VIPAS39-201ENST00000327028 OR5C1Q8NGR4 320 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms