RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TMEM50AO95807 157 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 C5orf30Q96GV9 206 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 PGPEP1Q9NXJ5 209 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 PEMTQ9UBM1 199 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 MYO7AQ13402 2215 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 TRBV6-7A0A0A0MS04 114 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 HIGD1CA8MV81 97 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 UPK2O00526 184 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 MCM3APO60318 1980 aa17.67■□□□□ 0.42
RNF40-201ENST00000324685 F5P12259 2224 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 PVRIGQ6DKI7 326 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 OR4X2Q8NGF9 303 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 CCL20P78556 96 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 DMRTA1Q5VZB9 504 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 LINC01587Q99440 93 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 ARFGEF1Q9Y6D6 1849 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 BSPH1Q075Z2 132 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 ZIC4Q8N9L1 334 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 FAM57AQ8TBR7 257 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 NUDT11Q96G61 164 aa17.66■□□□□ 0.42
RNF40-201ENST00000324685 APOMO95445 188 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 MUC21A0A0G2JKD1 596 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 MUC21A0A140T8X8 626 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 LDLRAD4O15165 306 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 LINC00271P0C7V0 271 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 ZNF883P0CG24 379 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 MUC21Q5SSG8 566 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 PGPEP1LA6NFU8 196 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 YPEL1O60688 119 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 SAA1P0DJI8 122 aaPredicted RBP17.65■□□□□ 0.42
RNF40-201ENST00000324685 PSG7Q13046 419 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 NUDT10Q8NFP7 164 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 OR5A1Q8NGJ0 315 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 YPEL2Q96QA6 119 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 A0A1B0GTI1 187 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 EPOPA6NHQ4 379 aa17.65■□□□□ 0.42
RNF40-201ENST00000324685 FABP5P3A8MUU1 101 aa17.64■□□□□ 0.42
RNF40-201ENST00000324685 IGHV1-2P23083 117 aa17.64■□□□□ 0.42
RNF40-201ENST00000324685 FAM19A2Q8N3H0 131 aa17.64■□□□□ 0.42
RNF40-201ENST00000324685 CA1P00915 261 aaPredicted RBP17.64■□□□□ 0.41
RNF40-201ENST00000324685 ST20Q9HBF5 79 aa17.64■□□□□ 0.41
RNF40-201ENST00000324685 NRN1Q9NPD7 142 aa17.64■□□□□ 0.41
RNF40-201ENST00000324685 STRCP1A6NGW2 1772 aa17.64■□□□□ 0.41
RNF40-201ENST00000324685 SCN4AP35499 1836 aa17.64■□□□□ 0.41
RNF40-201ENST00000324685 C15orf61A6NNL5 157 aa17.64■□□□□ 0.41
RNF40-201ENST00000324685 RSPO4Q2I0M5 234 aaPredicted RBP17.64■□□□□ 0.41
RNF40-201ENST00000324685 FAM201AQ5SY85 155 aa17.64■□□□□ 0.41
RNF40-201ENST00000324685 NBR2O15453 112 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 SERF1AO75920 110 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 TOMM7Q9P0U1 55 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 TDGF1P13385 188 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 PLPPR1Q8TBJ4 325 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 ADMP35318 185 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 FBLN5Q9UBX5 448 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 RGPD3A6NKT7 1758 aaPredicted RBP17.63■□□□□ 0.41
RNF40-201ENST00000324685 DOCK5Q9H7D0 1870 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 SAA2-SAA4A0A096LPE2 208 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 SAA2P0DJI9 122 aaPredicted RBP17.63■□□□□ 0.41
RNF40-201ENST00000324685 FAM71F2Q6NXP2 309 aa17.63■□□□□ 0.41
RNF40-201ENST00000324685 YAE1D1Q9NRH1 226 aa17.62■□□□□ 0.41
RNF40-201ENST00000324685 OSTCQ9NRP0 149 aa17.62■□□□□ 0.41
RNF40-201ENST00000324685 TDRD15B5MCY1 1934 aaKnown RBP17.62■□□□□ 0.41
RNF40-201ENST00000324685 MYOD1P15172 320 aa17.62■□□□□ 0.41
RNF40-201ENST00000324685 ST6GALNAC3Q8NDV1 305 aa17.62■□□□□ 0.41
RNF40-201ENST00000324685 LAMTOR2Q9Y2Q5 125 aa17.62■□□□□ 0.41
RNF40-201ENST00000324685 C17orf100A8MU93 164 aa17.62■□□□□ 0.41
RNF40-201ENST00000324685 IFI27P40305 119 aaPredicted RBP17.62■□□□□ 0.41
RNF40-201ENST00000324685 FAM168AQ92567 244 aa17.62■□□□□ 0.41
RNF40-201ENST00000324685 CLDN16Q9Y5I7 305 aa17.62■□□□□ 0.41
RNF40-201ENST00000324685 SRSF1Q07955 248 aaKnown RBP eCLIP17.61■□□□□ 0.419e-10■□□□□ 8.7
RNF40-201ENST00000324685 ZNF257Q9Y2Q1 563 aa17.61■□□□□ 0.41
RNF40-201ENST00000324685 GATA2P23769 480 aaPredicted RBP17.61■□□□□ 0.41
RNF40-201ENST00000324685 LINC00469Q8N7U9 141 aa17.61■□□□□ 0.41
RNF40-201ENST00000324685 OR5AN1Q8NGI8 311 aa17.61■□□□□ 0.41
RNF40-201ENST00000324685 ANKRD31Q8N7Z5 1873 aa17.61■□□□□ 0.41
RNF40-201ENST00000324685 ASCC3Q8N3C0 2202 aaKnown RBP17.61■□□□□ 0.41
RNF40-201ENST00000324685 FAM90A9PA6NNJ1 464 aa17.61■□□□□ 0.41
RNF40-201ENST00000324685 SMAD7O15105 426 aaKnown RBP17.61■□□□□ 0.41
RNF40-201ENST00000324685 TYMSP04818 313 aa17.61■□□□□ 0.41
RNF40-201ENST00000324685 RNF126Q9BV68 326 aa17.61■□□□□ 0.41
RNF40-201ENST00000324685 RNASE7Q9H1E1 156 aaKnown RBP17.61■□□□□ 0.41
RNF40-201ENST00000324685 EPDR1Q9UM22 224 aa17.61■□□□□ 0.41
RNF40-201ENST00000324685 TRGV2A0A075B6R0 118 aa17.6■□□□□ 0.41
RNF40-201ENST00000324685 GFRA3O60609 400 aa17.6■□□□□ 0.41
RNF40-201ENST00000324685 HBDP02042 147 aa17.6■□□□□ 0.41
RNF40-201ENST00000324685 DERL1Q9BUN8 251 aa17.6■□□□□ 0.41
RNF40-201ENST00000324685 TGFBR3LH3BV60 316 aa17.6■□□□□ 0.41
RNF40-201ENST00000324685 GNG5P63218 68 aa17.6■□□□□ 0.41
RNF40-201ENST00000324685 ZNF497Q6ZNH5 498 aa17.6■□□□□ 0.41
RNF40-201ENST00000324685 H3BUT2 72 aa17.6■□□□□ 0.41
RNF40-201ENST00000324685 TCRBV4S1A1TA0A5B7 111 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 GTF3AQ92664 365 aaKnown RBP17.59■□□□□ 0.41
RNF40-201ENST00000324685 A0A1W2PRE2 83 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 CCL1P22362 96 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 A0A0G2JMM0 328 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 A0A1W2PPB8 328 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 A0A1W2PRS3 328 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 KIR3DP1A8MWS1 328 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 F8VVB4 439 aa17.59■□□□□ 0.41
RNF40-201ENST00000324685 F8VWA3 439 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms