RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 SERF1AO75920 110 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 OR5G3P0C626 314 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 FRMD6-AS1P0C7T7 363 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 CT45A6P0DMU7 189 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 CT45A5P0DMU8 189 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 CT45A7P0DMV0 189 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 GNG4P50150 75 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 RANP62826 216 aaKnown RBP7.11□□□□□ -1.27
CLK1-201ENST00000321356 PSG5Q15238 335 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 TPTE2P1Q5T6R2 138 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 ZNF474Q6S9Z5 364 aaPredicted RBP7.11□□□□□ -1.27
CLK1-201ENST00000321356 PQLC2Q6ZP29 291 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 ZNF788Q6ZQV5 615 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 PIP4P1Q86T03 277 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 C20orf144Q9BQM9 153 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 GNB1LQ9BYB4 327 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 PLEKHA3Q9HB20 300 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 GCM1Q9NP62 436 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 OSTCQ9NRP0 149 aa7.11□□□□□ -1.27
CLK1-201ENST00000321356 TECRQ9NZ01 308 aaKnown RBP7.11□□□□□ -1.27
CLK1-201ENST00000321356 RPUSD1Q9UJJ7 312 aaKnown RBP7.11□□□□□ -1.27
CLK1-201ENST00000321356 ZFHX4Q86UP3 3567 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 CFAP47Q6ZTR5 3102 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 TEX50A0A1B0GTY4 177 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 HELTA6NFD8 242 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 SRRM4A7MD48 611 aaKnown RBP7.1□□□□□ -1.27
CLK1-201ENST00000321356 GGTLC3B5MD39 225 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 FCN1O00602 326 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 CEACAM4O75871 244 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 ACTL6BO94805 426 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 IGLV2-8P01709 118 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 MT-ND6P03923 174 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 RAB4AP20338 218 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 IER3P46695 156 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 CX3CL1P78423 397 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 OR5I1Q13606 314 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 MOB3BQ86TA1 216 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 MRPL52Q86TS9 123 aaKnown RBP7.1□□□□□ -1.27
CLK1-201ENST00000321356 OR1L8Q8NGR8 309 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 FAM122AQ96E09 287 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 TBX15Q96SF7 602 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 LRFN3Q9BTN0 628 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 HINT2Q9BX68 163 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 CBLN4Q9NTU7 201 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 BET1LQ9NYM9 111 aa7.1□□□□□ -1.27
CLK1-201ENST00000321356 A0A1W2PRE2 83 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 PSMB11A5LHX3 300 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 SNURFLB1AK76 121 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 ISLRO14498 428 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 MMP23AO75900 390 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 IGHV1-46P01743 117 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 IGKV1-16P04430 117 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 RNASE2P10153 161 aaKnown RBP7.09□□□□□ -1.27
CLK1-201ENST00000321356 CRYBB3P26998 211 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 RTL8BQ17RB0 113 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 OR8I2Q8N0Y5 310 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 ST6GALNAC3Q8NDV1 305 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 OR5B3Q8NH48 314 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 IGF2BP2-AS1Q96M15 143 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 KRTAP3-3Q9BYR6 98 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 SLC35D1Q9NTN3 355 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 SVILO95425 2214 aa7.09□□□□□ -1.27
CLK1-201ENST00000321356 F2Z2F3 143 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 INS-IGF2F8WCM5 200 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 M0R143 59 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 TCAPO15273 167 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 SAA1P0DJI8 122 aaPredicted RBP7.09□□□□□ -1.28
CLK1-201ENST00000321356 CD33P20138 364 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 GNG10P50151 68 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 TAS2R45P59539 299 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 CD69Q07108 199 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 COX19Q49B96 90 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 TEX36Q5VZQ5 186 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 WDR73Q6P4I2 378 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 TMEM136Q6ZRR5 245 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 ZNF833PQ6ZTB9 187 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 FAM216BQ8N7L0 139 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 OR5AU1Q8NGC0 362 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 OR9G1Q8NH87 305 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 CCL13Q99616 98 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 HSPB9Q9BQS6 159 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 SLC25A33Q9BSK2 321 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 FAM215AQ9Y5M1 114 aa7.09□□□□□ -1.28
CLK1-201ENST00000321356 SMIM27A0A1W2PRY6 76 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 ZNF705FA8MVS1 300 aaPredicted RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 OR7C2O60412 319 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 ZNF705DP0CH99 300 aaPredicted RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 ZNF705BP0CI00 300 aaPredicted RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 C8orf88P0DMB2 117 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 GATA2P23769 480 aaPredicted RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 CDKN1AP38936 164 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 COMPP49747 757 aaPredicted RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 PPOXP50336 477 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 TDGF1P3P51864 188 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 RPL19P84098 196 aaKnown RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 TNFAIP6P98066 277 aaPredicted RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 TIGITQ495A1 244 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 OR10J3Q5JRS4 329 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 VHLLQ6RSH7 139 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms