RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TGFAP01135 160 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 NRN1Q9NPD7 142 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 ARHGAP21Q5T5U3 1957 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 RIPPLY3P57055 190 aa14.36□□□□□ -0.11
SMCHD1-201ENST00000320876 ZNF815PA8K554 130 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 LHX8Q68G74 356 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 ZNF826PQ6ZT77 177 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 TMEM74BQ9NUR3 256 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 PPIAL4CA0A0B4J2A2 164 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 A0A0J9YW62 118 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 UBE2CO00762 179 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 PPIAL4GP0DN37 164 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 Q5BKY6 102 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 DRAM1Q8N682 238 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 SERF1AO75920 110 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 NPFFR1Q9GZQ6 430 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 DUSP15Q9H1R2 295 aaPredicted RBP14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 H3BTX0 84 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 FOXS1O43638 330 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 CCL4P13236 92 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 SEMA5BQ9P283 1151 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 SEC11AP67812 179 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 KLF14Q8TD94 323 aaPredicted RBP14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 TMEM106BQ9NUM4 274 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 CACNA1GO43497 2377 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 TRAV12-3A0A0B4J271 114 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 HOXA3O43365 443 aaPredicted RBP14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 SRP19P09132 144 aaKnown RBP14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 NPIPB3Q92617 1050 aa14.35□□□□□ -0.11
SMCHD1-201ENST00000320876 TRAV9-2A0A087WT02 112 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 MALP21145 153 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 LDLRAD2Q5SZI1 272 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 SCARF2Q96GP6 870 aaPredicted RBP14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 DPM2O94777 84 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 C9JCJ5 164 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 LINC00614P0C842 121 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 FER1L6-AS1Q8NA97 138 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 GNB1LQ9BYB4 327 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 COX5BP10606 129 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 CFAP161Q6P656 301 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 TMEM170AQ8WVE7 144 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 GDF15Q99988 308 aa14.34□□□□□ -0.11
SMCHD1-201ENST00000320876 SPINT1O43278 529 aa14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 SRSF6Q13247 344 aaKnown RBP14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 LTBP4Q8N2S1 1624 aa14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 IGKV1-8A0A0C4DH67 115 aa14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 TM4SF5O14894 197 aa14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 KIR3DL3Q8N743 410 aa14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 TMEM52Q8NDY8 209 aa14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 OR5P3Q8WZ94 311 aa14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 DCTN5Q9BTE1 182 aa14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 RPP25Q9BUL9 199 aaKnown RBP14.33□□□□□ -0.11
SMCHD1-201ENST00000320876 MGST2Q99735 147 aa14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 NHP2Q9NX24 153 aaKnown RBP14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 CD69Q07108 199 aa14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 SRSF4Q08170 494 aaKnown RBP14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 PEAR1Q5VY43 1037 aaPredicted RBP14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 RNASEH2CQ8TDP1 164 aaKnown RBP14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 LOC105371242A0A075B767 164 aa14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 TEX45Q8NA69 505 aa14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 CHCHD1Q96BP2 118 aaKnown RBP14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 RAMP1O60894 148 aa14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 ST20Q9HBF5 79 aa14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 ABCA4P78363 2273 aa14.33□□□□□ -0.12
SMCHD1-201ENST00000320876 IFI27P40305 119 aaPredicted RBP14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 GAGE13Q4V321 117 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 TMEM131Q92545 1883 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 TFF3Q07654 80 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 LEAP2Q969E1 77 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 TRAV21A0A0B4J279 112 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 LINC00587B1AMM8 73 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 COQ2Q96H96 371 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 MGAMO43451 1857 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 J3QW42 95 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 SAMD5Q5TGI4 173 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 AMELYQ99218 206 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 PKDREJQ9NTG1 2253 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 TMEM14DPA8MWL7 114 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 CACNG8Q8WXS5 425 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 SLC25A15Q9Y619 301 aa14.32□□□□□ -0.12
SMCHD1-201ENST00000320876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.32□□□□□ -0.124e-7■■■■■ 46.2
SMCHD1-201ENST00000320876 RNASE4P34096 147 aaKnown RBP14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 SRSF1Q07955 248 aaKnown RBP eCLIP14.31□□□□□ -0.121e-8■■■□□ 16.9
SMCHD1-201ENST00000320876 C9orf50Q5SZB4 431 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 Q9H3A6 140 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 TCF20Q9UGU0 1960 aaKnown RBP14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 LINC01559Q495D7 138 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 OSR1Q8TAX0 266 aaPredicted RBP14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 A8MWV9 139 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 OR52E5Q8NH55 327 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 DUX3Q96PT4 197 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 NXT2Q9NPJ8 142 aaKnown RBP14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BKO60814 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BJP06899 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BOP23527 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BBP33778 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BDP58876 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BCP62807 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST2H2BEQ16778 126 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms