RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 HTR1DP28221 377 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 MAS1LP35410 378 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 TMEM249Q2WGJ8 235 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 C1orf122Q6ZSJ8 110 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 TMEM144Q7Z5S9 345 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 KIR3DL3Q8N743 410 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 C1orf159Q96HA4 380 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 RITA1Q96K30 269 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
SSR4-201ENST00000320857 MALRD1Q5VYJ5 2156 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 H3BQ15 152 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 NDUFS6O75380 124 aaKnown RBP13.69□□□□□ -0.22
SSR4-201ENST00000320857 EIF3GO75821 320 aaKnown RBP eCLIP13.69□□□□□ -0.22
SSR4-201ENST00000320857 GPX4P36969 197 aaPredicted RBP13.69□□□□□ -0.22
SSR4-201ENST00000320857 CEACAM3P40198 252 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 RPL29P47914 159 aaKnown RBP13.69□□□□□ -0.22
SSR4-201ENST00000320857 B2MP61769 119 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 PSG5Q15238 335 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 PRSS8Q16651 343 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 TPTE2P1Q5T6R2 138 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 SLC35E3Q7Z769 313 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 CACNG8Q8WXS5 425 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 NIPSNAP3BQ9BS92 247 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 C20orf24Q9BUV8 137 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 SIRT7Q9NRC8 400 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 DPM3Q9P2X0 92 aa13.69□□□□□ -0.22
SSR4-201ENST00000320857 HELZ2Q9BYK8 2649 aaKnown RBP13.68□□□□□ -0.22
SSR4-201ENST00000320857 ACTL6BO94805 426 aa13.68□□□□□ -0.22
SSR4-201ENST00000320857 CRYGBP07316 175 aa13.68□□□□□ -0.22
SSR4-201ENST00000320857 CD69Q07108 199 aa13.68□□□□□ -0.22
SSR4-201ENST00000320857 RNASEH2CQ8TDP1 164 aaKnown RBP13.68□□□□□ -0.22
SSR4-201ENST00000320857 TVP23CQ96ET8 276 aa13.68□□□□□ -0.22
SSR4-201ENST00000320857 COL12A1Q99715 3063 aa13.68□□□□□ -0.22
SSR4-201ENST00000320857 CGB1A6NKQ9 187 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 NDUFS7O75251 213 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 GCSAMLQ5JQS6 135 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 C10orf55Q5SWW7 151 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 IQCF2Q8IXL9 164 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 STPG3Q8N7X2 389 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 C17orf50Q8WW18 174 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 SSMEM1Q8WWF3 244 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 SLC35E1Q96K37 410 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 TMPRSS5Q9H3S3 457 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 TPSG1Q9NRR2 321 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 KLF2Q9Y5W3 355 aaPredicted RBP13.67□□□□□ -0.22
SSR4-201ENST00000320857 LRBAP50851 2863 aa13.67□□□□□ -0.22
SSR4-201ENST00000320857 A0A1W2PPI3 338 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 E7EUB6 86 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 IGHV2-5P01817 119 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 PAX6P26367 422 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 RPL27AP46776 148 aaKnown RBP13.66□□□□□ -0.22
SSR4-201ENST00000320857 MEF2BQ02080 365 aaPredicted RBP13.66□□□□□ -0.22
SSR4-201ENST00000320857 WT1-ASQ06250 92 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 MRGPRG-AS1Q2M3A8 158 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 FAM90A2PQ658T7 463 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 SLC16A13Q7RTY0 426 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 TUBA4BQ9H853 241 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 METTL1Q9UBP6 276 aaKnown RBP13.66□□□□□ -0.22
SSR4-201ENST00000320857 SIGLEC9Q9Y336 463 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 UTP20O75691 2785 aaKnown RBP13.66□□□□□ -0.22
SSR4-201ENST00000320857 ODF3BA8MYP8 253 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 OVOL3O00110 214 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 AKR1C3P42330 323 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 PRR20EP86478 221 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 PRR20CP86479 221 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 PRR20DP86480 221 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 PRR20BP86481 221 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 PRR20AP86496 221 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 GAMTQ14353 236 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 C15orf54Q8N8G6 183 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 SLC45A2Q9UMX9 530 aa13.66□□□□□ -0.22
SSR4-201ENST00000320857 LOC105371267A0A1B0GV96 52 aa13.65□□□□□ -0.22
SSR4-201ENST00000320857 RHOBP62745 196 aa13.65□□□□□ -0.22
SSR4-201ENST00000320857 TNXAQ16473 311 aa13.65□□□□□ -0.22
SSR4-201ENST00000320857 SPOCK3Q9BQ16 436 aa13.65□□□□□ -0.22
SSR4-201ENST00000320857 TMEM250H0YL14 139 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 TIMM23O14925 209 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 CXorf1O96002 111 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 STAG3L2P0CL84 134 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 STAG3L3P0CL85 134 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 DEFA4P12838 97 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 CNTFRP26992 372 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 COL8A1P27658 744 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 COMPP49747 757 aaPredicted RBP13.64□□□□□ -0.23
SSR4-201ENST00000320857 CD81P60033 236 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 KLRD1Q13241 179 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 HCP5Q6MZN7 132 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 PPP1R27Q86WC6 154 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 NANPQ8TBE9 248 aa13.64□□□□□ -0.23
SSR4-201ENST00000320857 LINC00869P0C866 280 aa13.63□□□□□ -0.23
SSR4-201ENST00000320857 ZFP36P26651 326 aaKnown RBP13.63□□□□□ -0.23
SSR4-201ENST00000320857 OR10J1P30954 320 aa13.63□□□□□ -0.23
SSR4-201ENST00000320857 PNRC1Q12796 327 aaPredicted RBP13.63□□□□□ -0.23
SSR4-201ENST00000320857 VMO1Q7Z5L0 202 aa13.63□□□□□ -0.23
SSR4-201ENST00000320857 IGFBPL1Q8WX77 278 aa13.63□□□□□ -0.23
SSR4-201ENST00000320857 DOPEY1Q5JWR5 2465 aa13.63□□□□□ -0.23
SSR4-201ENST00000320857 FASNP49327 2511 aaKnown RBP13.63□□□□□ -0.23
SSR4-201ENST00000320857 A0A087WWC5 75 aa13.63□□□□□ -0.23
SSR4-201ENST00000320857 IGLC7A0M8Q6 106 aa13.63□□□□□ -0.23
SSR4-201ENST00000320857 B4DEV8 164 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms