RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 LPAR2Q9HBW0 351 aa13.05□□□□□ -0.32
USH1C-202ENST00000318024 IL36BQ9NZH7 164 aa13.05□□□□□ -0.32
USH1C-202ENST00000318024 KCNIP1Q9NZI2 227 aa13.05□□□□□ -0.32
USH1C-202ENST00000318024 METRNQ9UJH8 293 aa13.05□□□□□ -0.32
USH1C-202ENST00000318024 RNF114Q9Y508 228 aa13.05□□□□□ -0.32
USH1C-202ENST00000318024 CACNA1DQ01668 2161 aa13.05□□□□□ -0.32
USH1C-202ENST00000318024 ANKHD1Q8IWZ3 2542 aaKnown RBP13.04□□□□□ -0.32
USH1C-202ENST00000318024 IGHV3OR15-7A0A075B7D8 119 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 K7EN84 100 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 ARL14EPLP0DKL9 152 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 CBLN1P23435 193 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 OPRK1P41145 380 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 MZT1Q08AG7 82 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 SSX8Q7RTT4 187 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 H2BFWTQ7Z2G1 175 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 GALMQ96C23 342 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 C1orf159Q96HA4 380 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 RALYQ9UKM9 306 aaKnown RBP13.04□□□□□ -0.32
USH1C-202ENST00000318024 HBZP02008 142 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 IL6RP08887 468 aaPredicted RBP13.04□□□□□ -0.32
USH1C-202ENST00000318024 EDDM3BP56851 147 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 LINC00205P59089 165 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 HLA-DRB5Q30154 266 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 GCSAMQ8N6F7 178 aa13.04□□□□□ -0.32
USH1C-202ENST00000318024 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
USH1C-202ENST00000318024 TMEM30CPA0ZSE6 113 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 F2Z2F3 143 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 MPDU1O75352 247 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 CD3EP07766 207 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 LGALS4P56470 323 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 SLC35E4Q6ICL7 350 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 TREML4Q6UXN2 200 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 MGST2Q99735 147 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 HSPB9Q9BQS6 159 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 MRPL18Q9H0U6 180 aaKnown RBP13.03□□□□□ -0.32
USH1C-202ENST00000318024 PATZ1Q9HBE1 687 aaKnown RBP13.03□□□□□ -0.32
USH1C-202ENST00000318024 GCM1Q9NP62 436 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 PRB1P04280 392 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 OR9G9P0C7N8 305 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 FRMD6-AS1P0C7T7 363 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 CRISP2P16562 243 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 C11orf52Q96A22 123 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 GGTLC1Q9BX51 225 aa13.03□□□□□ -0.32
USH1C-202ENST00000318024 YTHDF2Q9Y5A9 579 aaKnown RBP13.03□□□□□ -0.32
USH1C-202ENST00000318024 HCFC1P51610 2035 aa13.02□□□□□ -0.32
USH1C-202ENST00000318024 ABCA4P78363 2273 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 A0A1W2PPV4 95 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 OOEPA6NGQ2 149 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 CTRLP40313 264 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 THBS3P49746 956 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 RANP62826 216 aaKnown RBP13.02□□□□□ -0.33
USH1C-202ENST00000318024 SMIM21Q3B7S5 101 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 COQ2Q96H96 371 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 IL19Q9UHD0 177 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 LY96Q9Y6Y9 160 aa13.02□□□□□ -0.33
USH1C-202ENST00000318024 TET2Q6N021 2002 aaPredicted RBP13.02□□□□□ -0.33
USH1C-202ENST00000318024 SRRM5B3KS81 715 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 AESQ08117 197 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 TMEM183BQ1AE95 376 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 ARSJQ5FYB0 599 aaPredicted RBP13.01□□□□□ -0.33
USH1C-202ENST00000318024 CD177Q8N6Q3 437 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 TPRX1Q8N7U7 411 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 PAM16Q9Y3D7 125 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 EPG5Q9HCE0 2579 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 C17orf100A8MU93 164 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 PROP1O75360 226 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 CXorf1O96002 111 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 TNFSF4P23510 183 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 VDAC2P45880 294 aaPredicted RBP13.01□□□□□ -0.33
USH1C-202ENST00000318024 GABRA2P47869 451 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 PDLIM3Q53GG5 364 aaPredicted RBP13.01□□□□□ -0.33
USH1C-202ENST00000318024 DEFB108BQ8NET1 73 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 OR5AU1Q8NGC0 362 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 TMEM204Q9BSN7 226 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 FBXL7Q9UJT9 491 aa13.01□□□□□ -0.33
USH1C-202ENST00000318024 LSM4Q9Y4Z0 139 aaKnown RBP13.01□□□□□ -0.33
USH1C-202ENST00000318024 C9JCJ5 164 aa13□□□□□ -0.33
USH1C-202ENST00000318024 SLC17A3O00476 420 aa13□□□□□ -0.33
USH1C-202ENST00000318024 ZNF90Q03938 601 aa13□□□□□ -0.33
USH1C-202ENST00000318024 IGKV1D-17A0A075B6S4 117 aa13□□□□□ -0.33
USH1C-202ENST00000318024 VSTM5A8MXK1 200 aa13□□□□□ -0.33
USH1C-202ENST00000318024 PRDX2P32119 198 aa13□□□□□ -0.33
USH1C-202ENST00000318024 MIC13Q5XKP0 118 aa13□□□□□ -0.33
USH1C-202ENST00000318024 Q8TCH9 128 aa13□□□□□ -0.33
USH1C-202ENST00000318024 VN1R17PQ8TDU5 208 aa13□□□□□ -0.33
USH1C-202ENST00000318024 HSD17B10Q99714 261 aaKnown RBP13□□□□□ -0.33
USH1C-202ENST00000318024 VAMP8Q9BV40 100 aa13□□□□□ -0.33
USH1C-202ENST00000318024 MS4A5Q9H3V2 200 aa13□□□□□ -0.33
USH1C-202ENST00000318024 V9GYV3 84 aa13□□□□□ -0.33
USH1C-202ENST00000318024 DCHS2Q6V1P9 2916 aa12.99□□□□□ -0.33
USH1C-202ENST00000318024 FAM90A9PA6NNJ1 464 aa12.99□□□□□ -0.33
USH1C-202ENST00000318024 LHBP01229 141 aa12.99□□□□□ -0.33
USH1C-202ENST00000318024 HNF1AP20823 631 aa12.99□□□□□ -0.33
USH1C-202ENST00000318024 RPL31P62899 125 aaKnown RBP12.99□□□□□ -0.33
USH1C-202ENST00000318024 BBC3Q96PG8 261 aaPredicted RBP12.99□□□□□ -0.33
USH1C-202ENST00000318024 SAA2-SAA4A0A096LPE2 208 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 TRGV10A0A0A0MS01 117 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 GPX1P07203 203 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 GCHFRP30047 84 aa12.98□□□□□ -0.33
USH1C-202ENST00000318024 APOBEC3AP31941 199 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms