RNA–Protein interactions for RNA: ENST00000317620.13

PROM2-201, Transcript of prominin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PROM2, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-201ENST00000317620 FOXA2Q9Y261 457 aaPredicted RBP11.32□□□□□ -0.6
PROM2-201ENST00000317620 GCGP01275 180 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 CD99P14209 185 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 TIMP3P35625 211 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 TCTAP57738 103 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 CX3CL1P78423 397 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 RELQ04864 619 aaPredicted RBP11.32□□□□□ -0.6
PROM2-201ENST00000317620 SRSF6Q13247 344 aaKnown RBP11.32□□□□□ -0.6
PROM2-201ENST00000317620 FBXL7Q9UJT9 491 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 CLDN16Q9Y5I7 305 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 IGHV1-46P01743 117 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 AMY1AP04745 511 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 SRIP30626 198 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 DDB2Q92466 427 aa11.32□□□□□ -0.6
PROM2-201ENST00000317620 IGKV3-15P01624 115 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
PROM2-201ENST00000317620 ANOS1P23352 680 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 ID3Q02535 119 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
PROM2-201ENST00000317620 CACNG8Q8WXS5 425 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 PNRC2Q9NPJ4 139 aaKnown RBP11.31□□□□□ -0.6
PROM2-201ENST00000317620 C21orf62Q9NYP8 219 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 NOTCH2Q04721 2471 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 IGHV3OR16-12A0A075B7B8 117 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 SELLP14151 372 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 MPZP25189 248 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 GPX4P36969 197 aaPredicted RBP11.31□□□□□ -0.6
PROM2-201ENST00000317620 MDS2Q8NDY4 140 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 F8VVB4 439 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 F8VWA3 439 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 CD55P08174 381 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 SRP19P09132 144 aaKnown RBP11.31□□□□□ -0.6
PROM2-201ENST00000317620 ZNF324BQ6AW86 544 aaPredicted RBP11.31□□□□□ -0.6
PROM2-201ENST00000317620 RNF144BQ7Z419 303 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 RTN4RL2Q86UN3 420 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 A8MXK9 166 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
PROM2-201ENST00000317620 TRGC1P0CF51 173 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 C2orf83Q53S99 150 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 WDR81Q562E7 1941 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 ACACBO00763 2458 aa11.31□□□□□ -0.6
PROM2-201ENST00000317620 CBY3A6NI87 242 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 SRRM5B3KS81 715 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 UPK2O00526 184 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 GPX1P07203 203 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 DLX1P56177 255 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 CLDND2Q8NHS1 167 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 ZSWIM8A7E2V4 1837 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 VENTXO95231 258 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 TMEM133Q9H2Q1 129 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 AP5S1Q9NUS5 200 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 PSPNO60542 156 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 CD24P25063 80 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 FAM166AQ6J272 317 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 PTPRQQ9UMZ3 2332 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 PLXNA3P51805 1871 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 GRIFINA4D1Z8 144 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 FOXI3A8MTJ6 420 aaPredicted RBP11.3□□□□□ -0.6
PROM2-201ENST00000317620 DUTP33316 252 aaKnown RBP11.3□□□□□ -0.6
PROM2-201ENST00000317620 ATP5G3P48201 142 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 B3GALT5-AS1P59052 145 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 RPS20P60866 119 aaKnown RBP11.3□□□□□ -0.6
PROM2-201ENST00000317620 LHFPL1Q86WI0 220 aa11.3□□□□□ -0.6
PROM2-201ENST00000317620 LRRK1Q38SD2 2015 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 TGFAP01135 160 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 GPR183P32249 361 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 WNT10AQ9GZT5 417 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 CBLN4Q9NTU7 201 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 CARHSP1Q9Y2V2 147 aaKnown RBP11.29□□□□□ -0.6
PROM2-201ENST00000317620 IGHV3-66A0A0C4DH42 116 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 DLX6P56179 175 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 MBNL2Q5VZF2 373 aaKnown RBP11.29□□□□□ -0.6
PROM2-201ENST00000317620 PPP1R27Q86WC6 154 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 OR52E5Q8NH55 327 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 ARPC1AQ92747 370 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 CBLN1P23435 193 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 NMUP48645 174 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 MIR17HGQ75NE6 70 aa11.29□□□□□ -0.6
PROM2-201ENST00000317620 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
PROM2-201ENST00000317620 SMAD7O15105 426 aaKnown RBP11.28□□□□□ -0.6
PROM2-201ENST00000317620 RBFOX2O43251 390 aaKnown RBP eCLIP11.28□□□□□ -0.6
PROM2-201ENST00000317620 SIAH2O43255 324 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 HEATR5AQ86XA9 2040 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 FANCMQ8IYD8 2048 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 WFIKKN1Q96NZ8 548 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 NOTCH4Q99466 2003 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 SAPCD1Q5SSQ6 148 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 ZNF502Q8TBZ5 544 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 SCO2A0A1W2PP80 73 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 C15orf61A6NNL5 157 aa11.28□□□□□ -0.6
PROM2-201ENST00000317620 HIST1H1AQ02539 215 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms