RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ELOA3CA0A087WX78 387 aaPredicted RBP11.55□□□□□ -0.56
VRK3-201ENST00000316763 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
VRK3-201ENST00000316763 GCSAMLQ5JQS6 135 aa11.55□□□□□ -0.56
VRK3-201ENST00000316763 MIC13Q5XKP0 118 aa11.55□□□□□ -0.56
VRK3-201ENST00000316763 TMEM170AQ8WVE7 144 aa11.55□□□□□ -0.56
VRK3-201ENST00000316763 SSX3Q99909 188 aa11.55□□□□□ -0.56
VRK3-201ENST00000316763 UBTD1Q9HAC8 227 aa11.55□□□□□ -0.56
VRK3-201ENST00000316763 PPIAL4EA0A075B759 164 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 PPIAL4DF5H284 164 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 UPK2O00526 184 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 TNFRSF13BO14836 293 aaPredicted RBP11.54□□□□□ -0.56
VRK3-201ENST00000316763 PFN1P07737 140 aaKnown RBP11.54□□□□□ -0.56
VRK3-201ENST00000316763 PPIAL4FP0DN26 164 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 GALR1P47211 349 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 HINT2Q9BX68 163 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 SRD5A3Q9H8P0 318 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 PLEKHA3Q9HB20 300 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 LSM4Q9Y4Z0 139 aaKnown RBP11.54□□□□□ -0.56
VRK3-201ENST00000316763 PPIAL4AQ9Y536 164 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 J3QR06 171 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 PPP1R2P9O14990 202 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 MMP23AO75900 390 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 FSTL3O95633 263 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 MT-CO2P00403 227 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 CA2P00918 260 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 APOA2P02652 100 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 STAG3L2P0CL84 134 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 STAG3L3P0CL85 134 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 CT45A6P0DMU7 189 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 CT45A5P0DMU8 189 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 CT45A7P0DMV0 189 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 DEFA4P12838 97 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 B2MP61769 119 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 RHOBP62745 196 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 RPL31P62899 125 aaKnown RBP11.54□□□□□ -0.56
VRK3-201ENST00000316763 RAB1BQ9H0U4 201 aa11.54□□□□□ -0.56
VRK3-201ENST00000316763 GAR1Q9NY12 217 aaKnown RBP11.54□□□□□ -0.56
VRK3-201ENST00000316763 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
VRK3-201ENST00000316763 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
VRK3-201ENST00000316763 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
VRK3-201ENST00000316763 RPL29P47914 159 aaKnown RBP11.53□□□□□ -0.56
VRK3-201ENST00000316763 UBE2G2P60604 165 aa11.53□□□□□ -0.56
VRK3-201ENST00000316763 PRCDQ00LT1 54 aa11.53□□□□□ -0.56
VRK3-201ENST00000316763 ARSJQ5FYB0 599 aaPredicted RBP11.53□□□□□ -0.56
VRK3-201ENST00000316763 SPNS3Q6ZMD2 512 aa11.53□□□□□ -0.56
VRK3-201ENST00000316763 PYGO2Q9BRQ0 406 aa11.53□□□□□ -0.56
VRK3-201ENST00000316763 CELSR2Q9HCU4 2923 aa11.53□□□□□ -0.56
VRK3-201ENST00000316763 SRP14P37108 136 aaKnown RBP11.52□□□□□ -0.56
VRK3-201ENST00000316763 ZNF833PQ6ZTB9 187 aa11.52□□□□□ -0.56
VRK3-201ENST00000316763 OR51G1Q8NGK1 321 aa11.52□□□□□ -0.56
VRK3-201ENST00000316763 SSMEM1Q8WWF3 244 aa11.52□□□□□ -0.56
VRK3-201ENST00000316763 FRZBQ92765 325 aa11.52□□□□□ -0.56
VRK3-201ENST00000316763 ZNF714Q96N38 554 aa11.52□□□□□ -0.56
VRK3-201ENST00000316763 BET1LQ9NYM9 111 aa11.52□□□□□ -0.56
VRK3-201ENST00000316763 AKAP6Q13023 2319 aa11.52□□□□□ -0.57
VRK3-201ENST00000316763 COL8A2P25067 703 aa11.52□□□□□ -0.57
VRK3-201ENST00000316763 KCNIP4Q6PIL6 250 aa11.52□□□□□ -0.57
VRK3-201ENST00000316763 STPG3Q8N7X2 389 aa11.52□□□□□ -0.57
VRK3-201ENST00000316763 NECAP1Q8NC96 275 aa11.52□□□□□ -0.57
VRK3-201ENST00000316763 OSR1Q8TAX0 266 aaPredicted RBP11.52□□□□□ -0.57
VRK3-201ENST00000316763 ABHD5Q8WTS1 349 aa11.52□□□□□ -0.57
VRK3-201ENST00000316763 PPP5D1E7EU14 171 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 NDUFB3O43676 98 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 CD99P14209 185 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 NPPCP23582 126 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 ATP5G3P48201 142 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 GNB1P62873 340 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 LRRC10Q5BKY1 277 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 OR5B3Q8NH48 314 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 NEU4Q8WWR8 484 aaPredicted RBP11.51□□□□□ -0.57
VRK3-201ENST00000316763 BTF3L4Q96K17 158 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 OR51M1Q9H341 326 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 KAAG1Q9UBP8 84 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 CENPEQ02224 2701 aa11.51□□□□□ -0.57
VRK3-201ENST00000316763 NDUFB4O95168 129 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 FABP1P07148 127 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 KRTAP10-9P60411 292 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 LYNX1G3V0Z9 82 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 LYNX1P0DP58 116 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 GCHFRP30047 84 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 C2orf83Q53S99 150 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 TMEM200BQ69YZ2 307 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 TMEM144Q7Z5S9 345 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 OR5T1Q8NG75 326 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 OR2T10Q8NGZ9 312 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 H1FXQ92522 213 aaKnown RBP11.5□□□□□ -0.57
VRK3-201ENST00000316763 C1orf159Q96HA4 380 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 PITPNC1Q9UKF7 332 aa11.5□□□□□ -0.57
VRK3-201ENST00000316763 SRRM4A7MD48 611 aaKnown RBP11.49□□□□□ -0.57
VRK3-201ENST00000316763 FCN3O75636 299 aa11.49□□□□□ -0.57
VRK3-201ENST00000316763 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
VRK3-201ENST00000316763 MYOD1P15172 320 aa11.49□□□□□ -0.57
VRK3-201ENST00000316763 FAM3BP58499 235 aaPredicted RBP11.49□□□□□ -0.57
VRK3-201ENST00000316763 FAM71F2Q6NXP2 309 aa11.49□□□□□ -0.57
VRK3-201ENST00000316763 LINC01551Q86U37 167 aa11.49□□□□□ -0.57
VRK3-201ENST00000316763 HIST3H2BBQ8N257 126 aa11.49□□□□□ -0.57
VRK3-201ENST00000316763 OR1L8Q8NGR8 309 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms