RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 SNAPINO95295 136 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 MBP02144 154 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 UBE2E1P51965 193 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 RPL8P62917 257 aaKnown RBP12.6□□□□□ -0.39
CALR-201ENST00000316448 HABP2Q14520 560 aaPredicted RBP12.6□□□□□ -0.39
CALR-201ENST00000316448 PSG5Q15238 335 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 C10orf55Q5SWW7 151 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 RARRES2Q99969 163 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 HINT2Q9BX68 163 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 SLC35B3Q9H1N7 401 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 HELZ2Q9BYK8 2649 aaKnown RBP12.6□□□□□ -0.39
CALR-201ENST00000316448 DNASE2O00115 360 aaPredicted RBP12.6□□□□□ -0.39
CALR-201ENST00000316448 CA2P00918 260 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 IFNA4P05014 189 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 LGALS7P47929 136 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 ZNF506Q5JVG8 444 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 TREML4Q6UXN2 200 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 ZNF709Q8N972 641 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.6□□□□□ -0.39
CALR-201ENST00000316448 MAPK1IP1LQ8NDC0 245 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 OR10W1Q8NGF6 305 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 NDUFA4L2Q9NRX3 87 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 LSM4Q9Y4Z0 139 aaKnown RBP12.6□□□□□ -0.39
CALR-201ENST00000316448 ABCA12Q86UK0 2595 aa12.6□□□□□ -0.39
CALR-201ENST00000316448 PLXNB1O43157 2135 aa12.59□□□□□ -0.39
CALR-201ENST00000316448 IGHV3OR16-10A0A075B7F0 116 aa12.59□□□□□ -0.39
CALR-201ENST00000316448 FNDC10F2Z333 226 aa12.59□□□□□ -0.39
CALR-201ENST00000316448 C17orf112F2Z3M2 114 aa12.59□□□□□ -0.39
CALR-201ENST00000316448 CEACAM3P40198 252 aa12.59□□□□□ -0.39
CALR-201ENST00000316448 NPBWR1P48145 328 aa12.59□□□□□ -0.39
CALR-201ENST00000316448 ATP5IP56385 69 aaPredicted RBP12.59□□□□□ -0.39
CALR-201ENST00000316448 HNF4GQ14541 408 aa12.59□□□□□ -0.39
CALR-201ENST00000316448 FFAR4Q5NUL3 377 aa12.59□□□□□ -0.39
CALR-201ENST00000316448 MAP1LC3B2A6NCE7 125 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 FAM74A7A6NL05 159 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 SOX15O60248 233 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 SLC25A16P16260 332 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 ICAM4Q14773 271 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 FAM74A3Q4VXF1 159 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 ARSJQ5FYB0 599 aaPredicted RBP12.58□□□□□ -0.39
CALR-201ENST00000316448 MINOS1Q5TGZ0 78 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 LCN15Q6UWW0 184 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 C1orf159Q96HA4 380 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 COMMD5Q9GZQ3 224 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 MAP1LC3BQ9GZQ8 125 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 BEX4Q9NWD9 120 aaPredicted RBP12.58□□□□□ -0.39
CALR-201ENST00000316448 MINOS1-NBL1R4GNA1 71 aa12.58□□□□□ -0.39
CALR-201ENST00000316448 ANKRD17O75179 2603 aaKnown RBP12.58□□□□□ -0.4
CALR-201ENST00000316448 FCN1O00602 326 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 HSPB1P04792 205 aaKnown RBP12.58□□□□□ -0.4
CALR-201ENST00000316448 MSMBP08118 114 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 LGALS4P56470 323 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 PMS2P11Q13670 270 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 HAGHQ16775 308 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 VMA21Q3ZAQ7 101 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 C2orf83Q53S99 150 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 KRTAP1-3Q8IUG1 177 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 TEX45Q8NA69 505 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 OR1L8Q8NGR8 309 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 FBXL15Q9H469 300 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 SIGLEC9Q9Y336 463 aa12.58□□□□□ -0.4
CALR-201ENST00000316448 CTXND1A0A1B0GTU2 59 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 LOC102723971A0A1B0GUV8 181 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 AVPP01185 164 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 SAA4P35542 130 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 OPRK1P41145 380 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 SSBP2P81877 361 aaPredicted RBP12.57□□□□□ -0.4
CALR-201ENST00000316448 PRSS8Q16651 343 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 FAM120AOSQ5T036 256 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 RUSC1-AS1Q66K80 236 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 CLRN3Q8NCR9 226 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 OR10G4Q8NGN3 311 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 OR10G9Q8NGN4 311 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 OR10G7Q8NGN6 311 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 EAF1Q96JC9 268 aaPredicted RBP12.57□□□□□ -0.4
CALR-201ENST00000316448 MGST2Q99735 147 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 GGTLC1Q9BX51 225 aa12.57□□□□□ -0.4
CALR-201ENST00000316448 SOX21Q9Y651 276 aaPredicted RBP12.57□□□□□ -0.4
CALR-201ENST00000316448 NPFFO15130 113 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
CALR-201ENST00000316448 RNASE2P10153 161 aaKnown RBP12.56□□□□□ -0.4
CALR-201ENST00000316448 FGF8P55075 233 aaPredicted RBP12.56□□□□□ -0.4
CALR-201ENST00000316448 SLC25A22Q9H936 323 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 NPVFQ9HCQ7 196 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 METTL1Q9UBP6 276 aaKnown RBP12.56□□□□□ -0.4
CALR-201ENST00000316448 TBL2Q9Y4P3 447 aaKnown RBP12.56□□□□□ -0.4
CALR-201ENST00000316448 APCP25054 2843 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 MAP1AP78559 2803 aaPredicted RBP12.56□□□□□ -0.4
CALR-201ENST00000316448 SEC14L6B5MCN3 397 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 RNF223E7ERA6 249 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 SRP19P09132 144 aaKnown RBP12.56□□□□□ -0.4
CALR-201ENST00000316448 BCL2P10415 239 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 LRRC75A-AS1Q8N1F1 130 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 GNG13Q9P2W3 67 aa12.56□□□□□ -0.4
CALR-201ENST00000316448 A0A1W2PN81 502 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 OOSP1A8MZH6 123 aa12.55□□□□□ -0.4
CALR-201ENST00000316448 CHRNA7P36544 502 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms