RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 TMEM242Q9NWH2 141 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 SPTAN1Q13813 2472 aaKnown RBP11.98□□□□□ -0.49
CLK4-201ENST00000316308 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.98□□□□□ -0.49
CLK4-201ENST00000316308 NKX6-3A6NJ46 265 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 CGB1A6NKQ9 187 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 FAM90A27PA6NNH2 459 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 HRASP01112 189 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 LINC00869P0C866 280 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 RPP30P78346 268 aaKnown RBP11.98□□□□□ -0.49
CLK4-201ENST00000316308 ASPHD1Q5U4P2 390 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 LHFPL4Q7Z7J7 247 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 C11orf42Q8N5U0 333 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 OR2T6Q8NHC8 308 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 PLEKHA3Q9HB20 300 aa11.98□□□□□ -0.49
CLK4-201ENST00000316308 PRCDQ00LT1 54 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 POU2AF1Q16633 256 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 LINC01551Q86U37 167 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 OR4P4Q8NGL7 312 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 DYNLRB1Q9NP97 96 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 ENY2Q9NPA8 101 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 REG1AP05451 166 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 GALR1P47211 349 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 GAMTQ14353 236 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 PYY3Q5JQD4 70 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 OR4X1Q8NH49 305 aa11.97□□□□□ -0.49
CLK4-201ENST00000316308 COL25A1Q9BXS0 654 aaPredicted RBP11.97□□□□□ -0.49
CLK4-201ENST00000316308 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
CLK4-201ENST00000316308 LINC00587B1AMM8 73 aa11.96□□□□□ -0.49
CLK4-201ENST00000316308 H7BYZ3 331 aa11.96□□□□□ -0.49
CLK4-201ENST00000316308 RTL8BQ17RB0 113 aa11.96□□□□□ -0.49
CLK4-201ENST00000316308 FAM78BQ5VT40 261 aa11.96□□□□□ -0.49
CLK4-201ENST00000316308 RAB1CQ92928 201 aa11.96□□□□□ -0.49
CLK4-201ENST00000316308 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.5
CLK4-201ENST00000316308 CNTFRP26992 372 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 CDX1P47902 265 aaPredicted RBP11.96□□□□□ -0.5
CLK4-201ENST00000316308 PRR20EP86478 221 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 PRR20CP86479 221 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 PRR20DP86480 221 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 PRR20BP86481 221 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 PRR20AP86496 221 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 OR10X1Q8NGY0 326 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 ZNF503Q96F45 646 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 GGACTQ9BVM4 153 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 GAL3ST2Q9H3Q3 398 aa11.96□□□□□ -0.5
CLK4-201ENST00000316308 MRPL36Q9P0J6 103 aaKnown RBP11.96□□□□□ -0.5
CLK4-201ENST00000316308 NDUFB3O43676 98 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 MPDU1O75352 247 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 DLX6P56179 175 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 WT1-ASQ06250 92 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 ADTRPQ96IZ2 230 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 GSN-AS1Q9NRJ2 163 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 RAXQ9Y2V3 346 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 WNK2Q9Y3S1 2297 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 HIVEP3Q5T1R4 2406 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 S100A8P05109 93 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 OR10J4P0C629 311 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 GCHFRP30047 84 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 OR10J1P30954 320 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 OR5AN1Q8NGI8 311 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 NABP2Q9BQ15 211 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 PRNDQ9UKY0 176 aa11.95□□□□□ -0.5
CLK4-201ENST00000316308 TRAV5A0A0B4J249 113 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 IGLV2-23P01705 113 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 SMIM6P0DI80 62 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 OR10A7Q8NGE5 316 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 OR10D4PQ8NGN7 298 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
CLK4-201ENST00000316308 MIOXQ9UGB7 285 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 A0A0U1RQK1 487 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 MRGPRG-AS1Q2M3A8 158 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 OCC1Q8TAD7 63 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 ST6GALNAC6Q969X2 333 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 CTDSP1Q9GZU7 261 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 SLC45A2Q9UMX9 530 aa11.94□□□□□ -0.5
CLK4-201ENST00000316308 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 SLC25A17O43808 307 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 FRMD6-AS1P0C7T7 363 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 MEF2CQ06413 473 aaPredicted RBP11.93□□□□□ -0.5
CLK4-201ENST00000316308 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 LRRC10Q5BKY1 277 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 TMEM37Q8WXS4 190 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 FLYWCH2Q96CP2 140 aaKnown RBP11.93□□□□□ -0.5
CLK4-201ENST00000316308 ZNF430Q9H8G1 570 aaPredicted RBP11.93□□□□□ -0.5
CLK4-201ENST00000316308 RAB9BQ9NP90 201 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 NDUFA4L2Q9NRX3 87 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 BET1LQ9NYM9 111 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 IGHV1-69-2A0A0G2JMI3 117 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 A0A1B0GUS0 222 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 K7EN84 100 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 CXorf1O96002 111 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 S100A9P06702 114 aaKnown RBP11.93□□□□□ -0.5
CLK4-201ENST00000316308 FABP4P15090 132 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 RPL29P47914 159 aaKnown RBP11.93□□□□□ -0.5
CLK4-201ENST00000316308 PYGO2Q9BRQ0 406 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 KCNIP2Q9NS61 270 aa11.93□□□□□ -0.5
CLK4-201ENST00000316308 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
CLK4-201ENST00000316308 RPL8P62917 257 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms