RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 DCAF16Q9NXF7 216 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 MPZL1O95297 269 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 Q0VG73 95 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 TMEM14EPQ6UXP3 125 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 C17orf82Q86X59 251 aaPredicted RBP7.47□□□□□ -1.21
COL6A5-202ENST00000312481 DRAM1Q8N682 238 aa7.47□□□□□ -1.21
COL6A5-202ENST00000312481 M0R3E3 92 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 MYOD1P15172 320 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 ERVK11-1P61568 191 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 SPSB2Q99619 263 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 ONECUT1Q9UBC0 465 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 PCOLCEQ15113 449 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 TNXAQ16473 311 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 PCSK4Q6UW60 755 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 SLC22A18ASQ8N1D0 253 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 TRGV9Q99603 122 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 IGHV3-9P01782 118 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 HOXB3P14651 431 aaPredicted RBP7.46□□□□□ -1.21
COL6A5-202ENST00000312481 COL10A1Q03692 680 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 DEFB127Q9H1M4 99 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 CACNA1AO00555 2505 aa7.46□□□□□ -1.21
COL6A5-202ENST00000312481 PRR19A6NJB7 356 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 NMSQ5H8A3 153 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 SAP25Q8TEE9 199 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 SPRY3O43610 288 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 SRIP30626 198 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 C2orf83Q53S99 150 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 TEX45Q8NA69 505 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 LYPD6BQ8NI32 183 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 ZNF775Q96BV0 537 aaPredicted RBP7.46□□□□□ -1.22
COL6A5-202ENST00000312481 PRCDQ00LT1 54 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 TTC32Q5I0X7 151 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 FAM57AQ8TBR7 257 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 SSMEM1Q8WWF3 244 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 FGF11Q92914 225 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 CHTOPQ9Y3Y2 248 aaKnown RBP7.46□□□□□ -1.22
COL6A5-202ENST00000312481 EEF1AKMT3Q96AZ1 226 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 SLC25A39Q9BZJ4 359 aaPredicted RBP7.46□□□□□ -1.22
COL6A5-202ENST00000312481 LYPD3O95274 346 aa7.46□□□□□ -1.22
COL6A5-202ENST00000312481 IL9P15248 144 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 CA5BP1Q8WTZ4 195 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 IFI27L2Q9H2X8 130 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 PTPRSQ13332 1948 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 FOXH1O75593 365 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 NXPH3O95157 252 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 NTN1O95631 604 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 ZNF83P51522 516 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 KLF14Q8TD94 323 aaPredicted RBP7.45□□□□□ -1.22
COL6A5-202ENST00000312481 JKAMPQ9P055 326 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 PILRBQ9UKJ0 227 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 TRIP6Q15654 476 aaKnown RBP7.45□□□□□ -1.22
COL6A5-202ENST00000312481 HIST1H2BLQ99880 126 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 SCTP09683 121 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 THY1P04216 161 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 EBLN2Q6P2I7 272 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 HIST3H2BBQ8N257 126 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 TCRBV4S1A1TA0A5B7 111 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 HIST1H4GQ99525 98 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 HS3ST3B1Q9Y662 390 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 NBEAP1P0C6P0 100 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 FAM106AQ4KMX7 169 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 CITED1Q99966 193 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 PRO1933Q9H354 126 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 IL36RNQ9UBH0 155 aa7.45□□□□□ -1.22
COL6A5-202ENST00000312481 PIEZO1Q92508 2521 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 LMX1BO60663 402 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 COL9A1P20849 921 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 AESQ08117 197 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 CXorf66Q5JRM2 361 aaPredicted RBP7.44□□□□□ -1.22
COL6A5-202ENST00000312481 TTC9CQ8N5M4 171 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 DNAL4O96015 105 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 ZNF880Q6PDB4 577 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 WDR83OSQ9Y284 106 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 IGFBP6P24592 240 aaPredicted RBP7.44□□□□□ -1.22
COL6A5-202ENST00000312481 FAM53AQ6NSI3 398 aaPredicted RBP7.44□□□□□ -1.22
COL6A5-202ENST00000312481 DTX4Q9Y2E6 619 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 TRBV20-1A0A075B6N2 111 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 HBDP02042 147 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 ZXDAP98168 799 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 SPATA46Q5T0L3 261 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 SFTA2Q6UW10 78 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 FOXJ2Q9P0K8 574 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 UFC1Q9Y3C8 167 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 RPL23P62829 140 aaKnown RBP7.44□□□□□ -1.22
COL6A5-202ENST00000312481 QRFPP83859 136 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 C3AR1Q16581 482 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 SPSB3Q6PJ21 355 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
COL6A5-202ENST00000312481 C8orf31Q8N9H6 132 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 NMUP48645 174 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 NUTF2P61970 127 aaKnown RBP7.44□□□□□ -1.22
COL6A5-202ENST00000312481 BCL6BQ8N143 479 aaPredicted RBP7.44□□□□□ -1.22
COL6A5-202ENST00000312481 OR5AN1Q8NGI8 311 aa7.44□□□□□ -1.22
COL6A5-202ENST00000312481 ZNF385AQ96PM9 386 aaKnown RBP7.44□□□□□ -1.22
COL6A5-202ENST00000312481 CX3CL1P78423 397 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 TMEM52Q8NDY8 209 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 KHDC1LQ5JSQ8 128 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 TEX38Q6PEX7 206 aa7.43□□□□□ -1.22
COL6A5-202ENST00000312481 FAM231DQ6ZW35 169 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms