RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 GUK1Q16774 197 aa13.38□□□□□ -0.27
CLCF1-201ENST00000312438 FFAR4Q5NUL3 377 aa13.38□□□□□ -0.27
CLCF1-201ENST00000312438 ACSM6Q6P461 480 aa13.38□□□□□ -0.27
CLCF1-201ENST00000312438 RNASEH2CQ8TDP1 164 aaKnown RBP13.38□□□□□ -0.27
CLCF1-201ENST00000312438 C17orf50Q8WW18 174 aa13.38□□□□□ -0.27
CLCF1-201ENST00000312438 TMEM231Q9H6L2 316 aa13.38□□□□□ -0.27
CLCF1-201ENST00000312438 FAM96BQ9Y3D0 163 aa13.38□□□□□ -0.27
CLCF1-201ENST00000312438 A0A1B0GV50 99 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 J3QKU1 62 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 FCN1O00602 326 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 CD24P25063 80 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 PAX6P26367 422 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 OPRK1P41145 380 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 GNB1P62873 340 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 CCL20P78556 96 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 CD69Q07108 199 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 RPP25LQ8N5L8 163 aaKnown RBP13.37□□□□□ -0.27
CLCF1-201ENST00000312438 OR10G4Q8NGN3 311 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 OR10G9Q8NGN4 311 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 OR10G7Q8NGN6 311 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 P2RX4Q99571 388 aa13.37□□□□□ -0.27
CLCF1-201ENST00000312438 EIF5A2Q9GZV4 153 aaKnown RBP13.37□□□□□ -0.27
CLCF1-201ENST00000312438 CENPVL3A0A0U1RRI6 287 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 IGLC7A0M8Q6 106 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 NPFFO15130 113 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 FAM106CPP0CH98 169 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 PLA2G2AP14555 144 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 M6PRP20645 277 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 ACOT6Q3I5F7 207 aaPredicted RBP13.36□□□□□ -0.27
CLCF1-201ENST00000312438 TMEM144Q7Z5S9 345 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 C1orf159Q96HA4 380 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 RCC1LQ96I51 464 aaKnown RBP13.36□□□□□ -0.27
CLCF1-201ENST00000312438 MGST2Q99735 147 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 SCRT1Q9BWW7 348 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 SLC39A9Q9NUM3 307 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 CYB5BO43169 146 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 BRS3P32247 399 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 SAA4P35542 130 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 AJUBAQ96IF1 538 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 SRSF8Q9BRL6 282 aaKnown RBP13.36□□□□□ -0.27
CLCF1-201ENST00000312438 SMDT1Q9H4I9 107 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 KCNIP2Q9NS61 270 aa13.36□□□□□ -0.27
CLCF1-201ENST00000312438 TET2Q6N021 2002 aaPredicted RBP13.35□□□□□ -0.27
CLCF1-201ENST00000312438 B4DSR2 109 aa13.35□□□□□ -0.27
CLCF1-201ENST00000312438 MSMBP08118 114 aa13.35□□□□□ -0.27
CLCF1-201ENST00000312438 GAMTQ14353 236 aa13.35□□□□□ -0.27
CLCF1-201ENST00000312438 Q8N6K4 173 aa13.35□□□□□ -0.27
CLCF1-201ENST00000312438 ZNF114Q8NC26 417 aa13.35□□□□□ -0.27
CLCF1-201ENST00000312438 SRSF12Q8WXF0 261 aaKnown RBP13.35□□□□□ -0.27
CLCF1-201ENST00000312438 GGTLC1Q9BX51 225 aa13.35□□□□□ -0.27
CLCF1-201ENST00000312438 ACTR3CQ9C0K3 210 aaPredicted RBP13.35□□□□□ -0.27
CLCF1-201ENST00000312438 BEX4Q9NWD9 120 aaPredicted RBP13.35□□□□□ -0.27
CLCF1-201ENST00000312438 RBFOX3A6NFN3 312 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 CNIH1O95406 144 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 APOC3P02656 99 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 KRTAP10-9P60411 292 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 MLANAQ16655 118 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 C5orf64Q2M2E5 130 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 PVRIGQ6DKI7 326 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 LCN15Q6UWW0 184 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 F8W036 122 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 RPL29P47914 159 aaKnown RBP13.34□□□□□ -0.27
CLCF1-201ENST00000312438 SSBP2P81877 361 aaPredicted RBP13.34□□□□□ -0.27
CLCF1-201ENST00000312438 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 SEC11CQ9BY50 192 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 PXMP4Q9Y6I8 212 aa13.34□□□□□ -0.27
CLCF1-201ENST00000312438 CTXND1A0A1B0GTU2 59 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 NCBP2LA6PVI3 153 aaKnown RBP13.33□□□□□ -0.28
CLCF1-201ENST00000312438 C9JQL5 133 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 REG1AP05451 166 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 AREGP15514 252 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 TMEM11P17152 192 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 MIC13Q5XKP0 118 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 ETFRF1Q6IPR1 90 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 SSX7Q7RTT5 188 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 SLC16A13Q7RTY0 426 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 OR1P1Q8NH06 330 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 SLC35E1Q96K37 410 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 C1RLQ9NZP8 487 aa13.33□□□□□ -0.28
CLCF1-201ENST00000312438 TNCP24821 2201 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 IGHV1-69DA0A0B4J2H0 117 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 MAP1LC3B2A6NCE7 125 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 IGHV1-69P01742 117 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 SFTA3P0C7M3 94 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 B2MP61769 119 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 FXYD3Q14802 87 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 ZNF562Q6V9R5 426 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 LRRC75A-AS1Q8N1F1 130 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 MAP1LC3BQ9GZQ8 125 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 C7orf69Q9H7B7 122 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 FAM208BQ5VWN6 2430 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 CORTO00230 105 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 ADCYAP1P18509 176 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 GATA3P23771 443 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 PMS2P11Q13670 270 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 DEFB113Q30KQ7 82 aa13.32□□□□□ -0.28
CLCF1-201ENST00000312438 FBLN7Q53RD9 439 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms