RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 IGHV1-69DA0A0B4J2H0 117 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 SOX15O60248 233 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 IGHV1-69P01742 117 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 TREML4Q6UXN2 200 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 COMMD1Q8N668 190 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 LINC01356Q8N9X3 169 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 AJUBAQ96IF1 538 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 C7orf69Q9H7B7 122 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 HIF1ANQ9NWT6 349 aa12.56□□□□□ -0.4
HERPUD1-201ENST00000300302 A0A1B0GW64 132 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 MBP02144 154 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 H2AFB1P0C5Y9 115 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 TMEM11P17152 192 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 ZP3P21754 424 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 TMEM41BQ5BJD5 291 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 MBD6Q96DN6 1003 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 NBPF19A0A087WUL8 3843 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 MED13LQ71F56 2210 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 CELSR2Q9HCU4 2923 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 TRAV40A0A0B4J280 105 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 IGLC7A0M8Q6 106 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 NCBP2LA6PVI3 153 aaKnown RBP12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 CNIH1O95406 144 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 RAB2AP61019 212 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 AKR1C1Q04828 323 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 LOXL1Q08397 574 aaPredicted RBP12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 RAB31Q13636 194 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 C5orf64Q2M2E5 130 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 ARSJQ5FYB0 599 aaPredicted RBP12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 Q8N6K4 173 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 RNASEH2CQ8TDP1 164 aaKnown RBP12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 CACNG8Q8WXS5 425 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 LINC00052Q96N35 136 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 SRSF8Q9BRL6 282 aaKnown RBP12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 C1RLQ9NZP8 487 aa12.55□□□□□ -0.4
HERPUD1-201ENST00000300302 A0A096LNT2 108 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 KRBOX1C9JBD0 128 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 FCN1O00602 326 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 GPX4P36969 197 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 ELLP55199 621 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 Q5PR19 223 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 TEPPQ6URK8 271 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 P2RX4Q99571 388 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 RPRMQ9NS64 109 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 ABCA2Q9BZC7 2435 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 VPS13CQ709C8 3753 aa12.54□□□□□ -0.4
HERPUD1-201ENST00000300302 BTBD17A6NE02 478 aa12.53□□□□□ -0.4
HERPUD1-201ENST00000300302 CD69Q07108 199 aa12.53□□□□□ -0.4
HERPUD1-201ENST00000300302 CCDC28AQ8IWP9 274 aa12.53□□□□□ -0.4
HERPUD1-201ENST00000300302 ANKRD17O75179 2603 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-201ENST00000300302 HBE1P02100 147 aa12.53□□□□□ -0.4
HERPUD1-201ENST00000300302 FFAR4Q5NUL3 377 aa12.53□□□□□ -0.4
HERPUD1-201ENST00000300302 PRSS57Q6UWY2 283 aa12.53□□□□□ -0.4
HERPUD1-201ENST00000300302 LSM4Q9Y4Z0 139 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-201ENST00000300302 DOPEY2Q9Y3R5 2298 aa12.52□□□□□ -0.4
HERPUD1-201ENST00000300302 TEX22C9J3V5 150 aa12.52□□□□□ -0.41
HERPUD1-201ENST00000300302 AGPAT2O15120 278 aa12.52□□□□□ -0.41
HERPUD1-201ENST00000300302 REG1AP05451 166 aa12.52□□□□□ -0.41
HERPUD1-201ENST00000300302 OPRK1P41145 380 aa12.52□□□□□ -0.41
HERPUD1-201ENST00000300302 SSBP2P81877 361 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-201ENST00000300302 RUSC1-AS1Q66K80 236 aa12.52□□□□□ -0.41
HERPUD1-201ENST00000300302 SFT2D1Q8WV19 159 aa12.52□□□□□ -0.41
HERPUD1-201ENST00000300302 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
HERPUD1-201ENST00000300302 IGHV3OR16-10A0A075B7F0 116 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 J3QLI3 93 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 CORTO00230 105 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 AREGP15514 252 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 FXYD3Q14802 87 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 ACOT6Q3I5F7 207 aaPredicted RBP12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 ETFRF1Q6IPR1 90 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 ACSM6Q6P461 480 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 ZNF562Q6V9R5 426 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 SLC16A13Q7RTY0 426 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 TMEM144Q7Z5S9 345 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 OR1P1Q8NH06 330 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 ABHD5Q8WTS1 349 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 SSMEM1Q8WWF3 244 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 NARS2Q96I59 477 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 SLC35E1Q96K37 410 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 MGST2Q99735 147 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 HELZ2Q9BYK8 2649 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 TRAV1-1A0A0B4J248 108 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 TSPAN9O75954 239 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 GAMTQ14353 236 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 FBLN7Q53RD9 439 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 FAM120AOSQ5T036 256 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 BRD3OSQ6XYD6 125 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 OR10G9Q8NGN4 311 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 OR10G7Q8NGN6 311 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 PBDC1Q9BVG4 233 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 GGTLC1Q9BX51 225 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 FAM96BQ9Y3D0 163 aa12.51□□□□□ -0.41
HERPUD1-201ENST00000300302 APELAP0DMC3 54 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms