RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 DCAF10Q5QP82 559 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 SAMD5Q5TGI4 173 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 OR5AN1Q8NGI8 311 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 DLL3Q9NYJ7 618 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 TRBV5-5A0A0J9YX44 114 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 A0A1B0GWJ7 208 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 MPZP25189 248 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 RNASE4P34096 147 aaKnown RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 WDR82Q6UXN9 313 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 ABHD12Q8N2K0 398 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 MARS2Q96GW9 593 aaKnown RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 NXT2Q9NPJ8 142 aaKnown RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 TRBV5-3A0A0A0MS03 114 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 LEPP41159 167 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 FOXA3P55318 350 aaPredicted RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 DUX3Q96PT4 197 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 GNB1LQ9BYB4 327 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 NACAE9PAV3 2078 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 ZFP36L2P47974 494 aaKnown RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 KCNK17Q96T54 332 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 CHTOPQ9Y3Y2 248 aaKnown RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 SYNGR3O43761 229 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BKO60814 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 DXOO77932 396 aaKnown RBP4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BJP06899 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 MALP21145 153 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BOP23527 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BBP33778 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BDP58876 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BCP62807 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST2H2BEQ16778 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BHQ93079 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 SCGB3A1Q96QR1 104 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BNQ99877 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BMQ99879 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 SPINT1O43278 529 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 CEACAM4O75871 244 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 UMODP07911 640 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 LIMS1P48059 325 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 SRSF6Q13247 344 aaKnown RBP4.73□□□□□ -1.65
CPSF2-201ENST00000298875 APCDD1LQ8NCL9 501 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 AMELYQ99218 206 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 LOC285556D6RIA3 1793 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF562Q6V9R5 426 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 RSPO3Q9BXY4 272 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-201ENST00000298875 PPP1R3EQ9H7J1 279 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 C9JCJ5 164 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM238C9JI98 176 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 LGALS1P09382 135 aaKnown RBP4.73□□□□□ -1.65
CPSF2-201ENST00000298875 IFITM3Q01628 133 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 CSRP2Q16527 193 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 DUSP15Q9H1R2 295 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-201ENST00000298875 TRBV7-9A0A0J9YWB2 115 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 CGAP01215 116 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 APOHP02749 345 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-201ENST00000298875 DTX2Q86UW9 622 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 WDYHV1Q96HA8 205 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 SCO2A0A1W2PP80 73 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 CELA2AP08217 269 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 P2RY6Q15077 328 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 ATP6V0BQ99437 205 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM106BQ9NUM4 274 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 SLC25A20O43772 301 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 OR9G9P0C7N8 305 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 GZMMP51124 257 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 ERVK11-1P61568 191 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 RPL39P5Q59GN2 51 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 GVINP1Q7Z2Y8 2422 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV24A0A0B4J272 114 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 SPAARA0A1B0GVQ0 90 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 NPPCP23582 126 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 HAPLN4Q86UW8 402 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 LOC105371242A0A075B767 164 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 PPIAL4CA0A0B4J2A2 164 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF688P0C7X2 276 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 PPIAL4GP0DN37 164 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 OCIAD2Q56VL3 154 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 OR10J3Q5JRS4 329 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 ASPHD2Q6ICH7 369 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 LILRA6Q6PI73 481 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 SPATA25Q9BR10 227 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM126AQ9H061 195 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 PLXNA1Q9UIW2 1896 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 FOXL2P58012 376 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM187Q14656 261 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 FAM214BQ7L5A3 538 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 NPFFR1Q9GZQ6 430 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 IL36BQ9NZH7 164 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 LY96Q9Y6Y9 160 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 A0A0J9YW62 118 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 LOC101059948A0A1B0GTJ6 334 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 TBR1Q16650 682 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 FAM19A2Q8N3H0 131 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 KLF14Q8TD94 323 aaPredicted RBP4.73□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF479Q96JC4 524 aa4.73□□□□□ -1.65
CPSF2-201ENST00000298875 TRIP12Q14669 1992 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 ATXN7O15265 892 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 SAA1P0DJI8 122 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 IL9P15248 144 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms