RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 M0QZK8 103 aa16.44■□□□□ 0.22
PACSIN3-201ENST00000298838 CLINT1Q14677 625 aa16.44■□□□□ 0.22
PACSIN3-201ENST00000298838 BSXQ3C1V8 233 aa16.44■□□□□ 0.22
PACSIN3-201ENST00000298838 SSMEM1Q8WWF3 244 aa16.44■□□□□ 0.22
PACSIN3-201ENST00000298838 TMEM160Q9NX00 188 aa16.44■□□□□ 0.22
PACSIN3-201ENST00000298838 IGHV7-81A0A0B4J1V7 117 aa16.43■□□□□ 0.22
PACSIN3-201ENST00000298838 HAPLN4Q86UW8 402 aa16.43■□□□□ 0.22
PACSIN3-201ENST00000298838 OR10P1Q8NGE3 313 aa16.43■□□□□ 0.22
PACSIN3-201ENST00000298838 TMEM170AQ8WVE7 144 aa16.43■□□□□ 0.22
PACSIN3-201ENST00000298838 PINX1Q96BK5 328 aaKnown RBP16.43■□□□□ 0.22
PACSIN3-201ENST00000298838 CYTL1Q9NRR1 136 aa16.43■□□□□ 0.22
PACSIN3-201ENST00000298838 IFNA4P05014 189 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 APELAP0DMC3 54 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 ARL16Q0P5N6 197 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 ETV3LQ6ZN32 361 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 LILRB2Q8N423 598 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 ABHD5Q8WTS1 349 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 SMR3AQ99954 134 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 SLA2Q9H6Q3 261 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 PMS2P5A8MQ11 134 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 JTBO76095 146 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 RNASE2P10153 161 aaKnown RBP16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 AREGP15514 252 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 SUB1P53999 127 aaKnown RBP eCLIP16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 NDPQ00604 133 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 SLC38A11Q08AI6 406 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 ZNF266Q14584 549 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 C2orf83Q53S99 150 aa16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 FAM103A1Q9BTL3 118 aaKnown RBP16.42■□□□□ 0.22
PACSIN3-201ENST00000298838 BORCS7-ASMTA0A0B4J1R7 106 aa16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 DFFBO76075 338 aa16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 REG1AP05451 166 aa16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 UBA52P62987 128 aaKnown RBP16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 RPL7L1Q6DKI1 246 aaKnown RBP16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 ZNF114Q8NC26 417 aa16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 ATP5SQ99766 215 aa16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 HSPB9Q9BQS6 159 aa16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 VPREB3Q9UKI3 123 aa16.41■□□□□ 0.22
PACSIN3-201ENST00000298838 LY6G6DO95868 133 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 AMY1AP04745 511 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 CD99P14209 185 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 FOSL1P15407 271 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 EIF5AP63241 154 aaKnown RBP16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 STOML3Q8TAV4 291 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 P2RX4Q99571 388 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 TMUB1Q9BVT8 246 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 WFDC1Q9HC57 220 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 HOXA3O43365 443 aaPredicted RBP16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 TPT1P13693 172 aaKnown RBP16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 IFITM2Q01629 132 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 SCGB2A2Q13296 93 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 TUSC1Q2TAM9 212 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 ST8SIA2Q92186 375 aa16.4■□□□□ 0.22
PACSIN3-201ENST00000298838 SH2D7A6NKC9 451 aaPredicted RBP16.39■□□□□ 0.21
PACSIN3-201ENST00000298838 SIGLECL1Q8N7X8 197 aa16.39■□□□□ 0.21
PACSIN3-201ENST00000298838 UBAC2Q8NBM4 344 aa16.39■□□□□ 0.21
PACSIN3-201ENST00000298838 PARP11Q9NR21 331 aa16.39■□□□□ 0.21
PACSIN3-201ENST00000298838 ATP6V1FQ16864 119 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 TEX261Q6UWH6 196 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 OR1P1Q8NH06 330 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 TNFRSF19Q9NS68 423 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 FBXO7Q9Y3I1 522 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 PRSS46E5RG02 174 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 ATP6V0E1O15342 81 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 RBMS3Q6XE24 437 aaKnown RBP16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 BAP18Q8IXM2 172 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 SGMS2Q8NHU3 365 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 TMEM147Q9BVK8 224 aa16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 F11RQ9Y624 299 aaKnown RBP16.38■□□□□ 0.21
PACSIN3-201ENST00000298838 HIVEP2P31629 2446 aa16.37■□□□□ 0.21
PACSIN3-201ENST00000298838 LFNGQ8NES3 379 aa16.37■□□□□ 0.21
PACSIN3-201ENST00000298838 GGACTQ9BVM4 153 aa16.37■□□□□ 0.21
PACSIN3-201ENST00000298838 IFNA5P01569 189 aa16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 EGR2P11161 476 aaPredicted RBP16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 CTRB1P17538 263 aa16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 C9orf152Q5JTZ5 239 aa16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 ASPHD1Q5U4P2 390 aa16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 CTRB2Q6GPI1 263 aa16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 SLC25A24Q6NUK1 477 aa16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 RNASEH2CQ8TDP1 164 aaKnown RBP16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 UQCC1Q9NVA1 299 aa16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 SETXQ7Z333 2677 aaKnown RBP16.36■□□□□ 0.21
PACSIN3-201ENST00000298838 NPIPB5A8MRT5 1133 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 CFDP00746 253 aaPredicted RBP16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 IFNA7P01567 189 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 DEFA4P12838 97 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 DLK1P80370 383 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 CDC42EP3Q9UKI2 254 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 UBE2L5PA0A1B0GUS4 154 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 CORTO00230 105 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 VWC2Q2TAL6 325 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 TMEM86BQ8N661 226 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 ZNF680Q8NEM1 530 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 OR1L6Q8NGR2 347 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 PHYHIPLQ96FC7 376 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 WNT10AQ9GZT5 417 aa16.35■□□□□ 0.21
PACSIN3-201ENST00000298838 RGS13O14921 159 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 FBXO24O75426 580 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 CRYGCP07315 174 aa16.34■□□□□ 0.21
PACSIN3-201ENST00000298838 BLCAPP62952 87 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms