RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ASPHD1Q5U4P2 390 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 C1QL4Q86Z23 238 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 C11orf42Q8N5U0 333 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 OR10X1Q8NGY0 326 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 PLEKHA3Q9HB20 300 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 SOD3P08294 240 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 LINC00869P0C866 280 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 RPP30P78346 268 aaKnown RBP9.55□□□□□ -0.88
RHO-201ENST00000296271 PRCDQ00LT1 54 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
RHO-201ENST00000296271 RTL8BQ17RB0 113 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 TEPPQ6URK8 271 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 PCGF1Q9BSM1 259 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 GAL3ST2Q9H3Q3 398 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 MANBALQ9NQG1 85 aa9.55□□□□□ -0.88
RHO-201ENST00000296271 CXorf65A6NEN9 183 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 B4DEV8 164 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 PFN1P07737 140 aaKnown RBP9.54□□□□□ -0.88
RHO-201ENST00000296271 STAG3L2P0CL84 134 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 STAG3L3P0CL85 134 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 PMS2P11Q13670 270 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 GAMTQ14353 236 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 MORN5Q5VZ52 161 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 C1orf87Q8N0U7 546 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 OR4P4Q8NGL7 312 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 GPR61Q9BZJ8 451 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 IGHV1-69-2A0A0G2JMI3 117 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 A0A1W2PPQ1 181 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 PHOX2AO14813 284 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 RD3LP0DJH9 198 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 DLX6P56179 175 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 POU2AF1Q16633 256 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 FAM78BQ5VT40 261 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 NABP2Q9BQ15 211 aa9.54□□□□□ -0.88
RHO-201ENST00000296271 MRPL36Q9P0J6 103 aaKnown RBP9.54□□□□□ -0.88
RHO-201ENST00000296271 ENSAO43768 121 aaKnown RBP9.53□□□□□ -0.88
RHO-201ENST00000296271 RNASE2P10153 161 aaKnown RBP9.53□□□□□ -0.88
RHO-201ENST00000296271 OR10J1P30954 320 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 WT1-ASQ06250 92 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 LRRC10Q5BKY1 277 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 OR10A7Q8NGE5 316 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 ACY3Q96HD9 319 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 NIT2Q9NQR4 276 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 PRNDQ9UKY0 176 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 IGHV3-21A0A0B4J1V1 117 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 H7BYZ3 331 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 SLC25A17O43808 307 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 OR10J4P0C629 311 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 GALR1P47211 349 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 LINC01551Q86U37 167 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 OR5AN1Q8NGI8 311 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 CACNA1BQ00975 2339 aa9.53□□□□□ -0.88
RHO-201ENST00000296271 TRAV5A0A0B4J249 113 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 A0A0U1RQK1 487 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 CCL21O00585 134 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 IGLV2-23P01705 113 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 HOXA5P20719 270 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 GCHFRP30047 84 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 CTAG1AP78358 180 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 PRR20EP86478 221 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 PRR20CP86479 221 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 PRR20DP86480 221 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 PRR20BP86481 221 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 PRR20AP86496 221 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 MEF2CQ06413 473 aaPredicted RBP9.52□□□□□ -0.89
RHO-201ENST00000296271 ST6GALNAC6Q969X2 333 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 FLYWCH2Q96CP2 140 aaKnown RBP9.52□□□□□ -0.89
RHO-201ENST00000296271 ZNF503Q96F45 646 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 VKORC1Q9BQB6 163 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 GGACTQ9BVM4 153 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 FNDC4Q9H6D8 234 aaPredicted RBP9.52□□□□□ -0.89
RHO-201ENST00000296271 ZNF430Q9H8G1 570 aaPredicted RBP9.52□□□□□ -0.89
RHO-201ENST00000296271 RAB9BQ9NP90 201 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 MPDU1O75352 247 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 CD3EP07766 207 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 MRGPRG-AS1Q2M3A8 158 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 OR4X1Q8NH49 305 aa9.52□□□□□ -0.89
RHO-201ENST00000296271 IGHV1-8P0DP01 117 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 APOBEC3AP31941 199 aaPredicted RBP9.51□□□□□ -0.89
RHO-201ENST00000296271 RPL8P62917 257 aaKnown RBP9.51□□□□□ -0.89
RHO-201ENST00000296271 TMEM155Q4W5P6 130 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 RAB1CQ92928 201 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 COMMD5Q9GZQ3 224 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 NDUFA4L2Q9NRX3 87 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 TMEM242Q9NWH2 141 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 BET1LQ9NYM9 111 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 SLC45A2Q9UMX9 530 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 APOA2P02652 100 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 COX7A1P24310 79 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 HCP5Q6MZN7 132 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 MUC15Q8N387 334 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 OCC1Q8TAD7 63 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 TMEM37Q8WXS4 190 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 UHRF2Q96PU4 802 aa9.51□□□□□ -0.89
RHO-201ENST00000296271 TRBV24-1A0A075B6N3 115 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 CXorf1O96002 111 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 FRMD6-AS1P0C7T7 363 aa9.5□□□□□ -0.89
RHO-201ENST00000296271 ZNF90Q03938 601 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms