RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 OR52E5Q8NH55 327 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 TMEM174Q8WUU8 243 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 E9PQ18 207 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 NDPQ00604 133 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 SCO2A0A1W2PP80 73 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 FGF9P31371 208 aaPredicted RBP10.48□□□□□ -0.73
SLX4-201ENST00000294008 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
SLX4-201ENST00000294008 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
SLX4-201ENST00000294008 TBR1Q16650 682 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 FAM27BQ5VT28 67 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 ZNF329Q86UD4 541 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 THBDP07204 575 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 CCL3L1P16619 93 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 ZIC1Q15915 447 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 C1orf53Q5VUE5 145 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 TMEM91Q6ZNR0 172 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 TMEM222Q9H0R3 208 aa10.48□□□□□ -0.73
SLX4-201ENST00000294008 PHIPQ8WWQ0 1821 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 KLK8O60259 260 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 PAX8Q06710 450 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 HMGCLL1Q8TB92 370 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 TRAV12-1A0A0B4J245 112 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 C1QAP02745 245 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 SRSF1Q07955 248 aaKnown RBP eCLIP10.47□□□□□ -0.73
SLX4-201ENST00000294008 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 FMC1Q96HJ9 113 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 TIMM17AQ99595 171 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 ARHGEF17Q96PE2 2063 aaPredicted RBP10.47□□□□□ -0.73
SLX4-201ENST00000294008 SSBP2P81877 361 aaPredicted RBP10.47□□□□□ -0.73
SLX4-201ENST00000294008 APCDD1LQ8NCL9 501 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 MARVELD1Q9BSK0 173 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 OR11H7Q8NGC8 314 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 ERG28Q9UKR5 140 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 MYO7AQ13402 2215 aa10.47□□□□□ -0.73
SLX4-201ENST00000294008 TRIP11Q15643 1979 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 UCP1P25874 307 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 FAM209AQ5JX71 171 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 ZNF501Q96CX3 271 aaPredicted RBP10.46□□□□□ -0.73
SLX4-201ENST00000294008 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.46□□□□□ -0.73
SLX4-201ENST00000294008 MBD3L4A6NDZ8 208 aaPredicted RBP10.46□□□□□ -0.73
SLX4-201ENST00000294008 MBD3L3A6NE82 208 aaPredicted RBP10.46□□□□□ -0.73
SLX4-201ENST00000294008 MBD3L5A6NJ08 208 aaPredicted RBP10.46□□□□□ -0.73
SLX4-201ENST00000294008 SCAND1P57086 179 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 TFF3Q07654 80 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 TPTE2P1Q5T6R2 138 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 LINC00518Q8N0U6 118 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 MBD3L2Q8NHZ7 208 aaPredicted RBP10.46□□□□□ -0.73
SLX4-201ENST00000294008 TEX48A0A1B0GUV7 120 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 NBR2O15453 112 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 TFF1P04155 84 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 PCP4P48539 62 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 DMKNQ6E0U4 476 aaPredicted RBP10.46□□□□□ -0.73
SLX4-201ENST00000294008 XAF1Q6GPH4 301 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 RNF114Q9Y508 228 aa10.46□□□□□ -0.73
SLX4-201ENST00000294008 UMODP07911 640 aa10.46□□□□□ -0.74
SLX4-201ENST00000294008 IFI27L2Q9H2X8 130 aa10.46□□□□□ -0.74
SLX4-201ENST00000294008 FCN3O75636 299 aa10.46□□□□□ -0.74
SLX4-201ENST00000294008 TMEM52Q8NDY8 209 aa10.46□□□□□ -0.74
SLX4-201ENST00000294008 SMIM2Q9BVW6 85 aa10.46□□□□□ -0.74
SLX4-201ENST00000294008 CELA3AP09093 270 aa10.46□□□□□ -0.74
SLX4-201ENST00000294008 SCN1AP35498 2009 aa10.46□□□□□ -0.74
SLX4-201ENST00000294008 RGPD5Q99666 1765 aa10.46□□□□□ -0.74
SLX4-201ENST00000294008 LEPROTO15243 131 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 KLRD1Q13241 179 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 ZNFX1Q9P2E3 1918 aaKnown RBP10.45□□□□□ -0.74
SLX4-201ENST00000294008 DTX1Q86Y01 620 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 GDF15Q99988 308 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 IGHV3-16A0A0C4DH30 117 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 ZNF600Q6ZNG1 722 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 SVILO95425 2214 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 PTGDSP41222 190 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 NIT1Q86X76 327 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 PFN2P35080 140 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 HIST1H2BAQ96A08 127 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 Q9HAA7 133 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 PILRBQ9UKJ0 227 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 DMRT1Q9Y5R6 373 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 CHD2O14647 1828 aaKnown RBP10.45□□□□□ -0.74
SLX4-201ENST00000294008 EPDR1Q9UM22 224 aa10.45□□□□□ -0.74
SLX4-201ENST00000294008 N4BP2Q86UW6 1770 aaPredicted RBP10.45□□□□□ -0.74
SLX4-201ENST00000294008 RPL15P61313 204 aaKnown RBP10.44□□□□□ -0.74
SLX4-201ENST00000294008 MIR17HGQ75NE6 70 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 RP1P56715 2156 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 SCN2AQ99250 2005 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 TRAV9-2A0A087WT02 112 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 IGKV2-40A0A087WW87 121 aaPredicted RBP10.44□□□□□ -0.74
SLX4-201ENST00000294008 IGKV2D-40P01614 121 aaPredicted RBP10.44□□□□□ -0.74
SLX4-201ENST00000294008 SCRT1Q9BWW7 348 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 IGKV1D-16P01601 117 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 PSPNO60542 156 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 GCM2O75603 506 aaPredicted RBP10.44□□□□□ -0.74
SLX4-201ENST00000294008 DPM2O94777 84 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 KLF5Q13887 457 aaPredicted RBP10.44□□□□□ -0.74
SLX4-201ENST00000294008 NR2C2APQ86WQ0 139 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
SLX4-201ENST00000294008 MMP23AO75900 390 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms