RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 UPK2O00526 184 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 KBTBD11O94819 623 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 FOLR2P14207 255 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 PVALBP20472 110 aaPredicted RBP14.15□□□□□ -0.14
CCDC78-201ENST00000293889 SNCAP37840 140 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 RELBQ01201 579 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 MRGPRG-AS1Q2M3A8 158 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 RBMS3Q6XE24 437 aaKnown RBP14.15□□□□□ -0.14
CCDC78-201ENST00000293889 Q8N9W7 124 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 VSTM2AQ8TAG5 236 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 TMEM167AQ8TBQ9 72 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 BSCL2Q96G97 398 aaPredicted RBP14.15□□□□□ -0.14
CCDC78-201ENST00000293889 TMEM231Q9H6L2 316 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 C1RLQ9NZP8 487 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 CACFD1Q9UGQ2 172 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 PITPNC1Q9UKF7 332 aa14.15□□□□□ -0.14
CCDC78-201ENST00000293889 A0A1B0GU03 582 aa14.14□□□□□ -0.15
CCDC78-201ENST00000293889 BTBD17A6NE02 478 aa14.14□□□□□ -0.15
CCDC78-201ENST00000293889 PLGLAQ15195 96 aa14.14□□□□□ -0.15
CCDC78-201ENST00000293889 C5orf64Q2M2E5 130 aa14.14□□□□□ -0.15
CCDC78-201ENST00000293889 PRIMA1Q86XR5 153 aa14.14□□□□□ -0.15
CCDC78-201ENST00000293889 OR4A5Q8NH83 315 aa14.14□□□□□ -0.15
CCDC78-201ENST00000293889 SMDT1Q9H4I9 107 aa14.14□□□□□ -0.15
CCDC78-201ENST00000293889 VPREB3Q9UKI3 123 aa14.14□□□□□ -0.15
CCDC78-201ENST00000293889 RCL1Q9Y2P8 373 aaKnown RBP14.14□□□□□ -0.15
CCDC78-201ENST00000293889 FCN1O00602 326 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 CHST1O43916 411 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 SCGB1D2O95969 90 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 SLC25A6P12236 298 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 OR2B8PP59922 312 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 PEA15Q15121 130 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 PPP1R27Q86WC6 154 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 CLCC1Q96S66 551 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 HIPK2Q9H2X6 1198 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 ZNF430Q9H8G1 570 aaPredicted RBP14.13□□□□□ -0.15
CCDC78-201ENST00000293889 MOB4Q9Y3A3 225 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 TNCP24821 2201 aa14.13□□□□□ -0.15
CCDC78-201ENST00000293889 C9JQL5 133 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 PITX3O75364 302 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 PRSS8Q16651 343 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 TMEM88Q6PEY1 159 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 CBLN2Q8IUK8 224 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 LFNGQ8NES3 379 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 OR4A16Q8NH70 328 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 DUX5Q96PT3 197 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 TUBA4BQ9H853 241 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.12□□□□□ -0.15
CCDC78-201ENST00000293889 COA4Q9NYJ1 87 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 C15orf61A6NNL5 157 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 RBMXL2O75526 392 aaKnown RBP14.12□□□□□ -0.15
CCDC78-201ENST00000293889 TSPAN15O95858 294 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 MYOD1P15172 320 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 HOXA1P49639 335 aaPredicted RBP14.12□□□□□ -0.15
CCDC78-201ENST00000293889 RPL8P62917 257 aaKnown RBP14.12□□□□□ -0.15
CCDC78-201ENST00000293889 LINC00518Q8N0U6 118 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 TMEM86BQ8N661 226 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 C5orf56Q8N8D9 126 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 QTRT1Q9BXR0 403 aaKnown RBP14.12□□□□□ -0.15
CCDC78-201ENST00000293889 SMIM3Q9BZL3 60 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 ESM1Q9NQ30 184 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 SMCO4Q9NRQ5 59 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 TMEM14BQ9NUH8 114 aa14.12□□□□□ -0.15
CCDC78-201ENST00000293889 DNAJC9-AS1A6NH13 148 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 AMY1AP04745 511 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 EWSR1Q01844 656 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC78-201ENST00000293889 ID3Q02535 119 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 C16orf82Q7Z2V1 217 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 MMD2Q8IY49 270 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 OR2C3Q8N628 320 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 C15orf54Q8N8G6 183 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 RASL11BQ9BPW5 248 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 PRNDQ9UKY0 176 aa14.11□□□□□ -0.15
CCDC78-201ENST00000293889 FOXA2Q9Y261 457 aaPredicted RBP14.11□□□□□ -0.15
CCDC78-201ENST00000293889 COLCA2A8K830 154 aa14.1□□□□□ -0.15
CCDC78-201ENST00000293889 PLXNB1O43157 2135 aa14.1□□□□□ -0.15
CCDC78-201ENST00000293889 NXPH3O95157 252 aa14.1□□□□□ -0.15
CCDC78-201ENST00000293889 AARDQ4LEZ3 155 aa14.1□□□□□ -0.15
CCDC78-201ENST00000293889 CXorf66Q5JRM2 361 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-201ENST00000293889 ZNF418Q8TF45 676 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-201ENST00000293889 SLC25A31Q9H0C2 315 aa14.1□□□□□ -0.15
CCDC78-201ENST00000293889 LYRM2Q9NU23 88 aaPredicted RBP14.1□□□□□ -0.15
CCDC78-201ENST00000293889 MLXQ9UH92 298 aa14.1□□□□□ -0.15
CCDC78-201ENST00000293889 SH2D7A6NKC9 451 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-201ENST00000293889 M0QZK8 103 aa14.09□□□□□ -0.15
CCDC78-201ENST00000293889 CA2P00918 260 aa14.09□□□□□ -0.15
CCDC78-201ENST00000293889 NKX2-1P43699 371 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-201ENST00000293889 RIPPLY3P57055 190 aa14.09□□□□□ -0.15
CCDC78-201ENST00000293889 GNB1P62873 340 aa14.09□□□□□ -0.15
CCDC78-201ENST00000293889 SSBP2P81877 361 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-201ENST00000293889 ZNF266Q14584 549 aa14.09□□□□□ -0.15
CCDC78-201ENST00000293889 GUK1Q16774 197 aa14.09□□□□□ -0.15
CCDC78-201ENST00000293889 ZNF429Q86V71 674 aa14.09□□□□□ -0.15
CCDC78-201ENST00000293889 OR51B2Q9Y5P1 312 aa14.09□□□□□ -0.15
CCDC78-201ENST00000293889 TEX50A0A1B0GTY4 177 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 UMAD1C9J7I0 102 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 HLA-DRB1P01911 266 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 OPN1MWP04001 364 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 OPN1MW2P0DN77 364 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 OPN1MW3P0DN78 364 aa14.08□□□□□ -0.15
CCDC78-201ENST00000293889 CAMLGP49069 296 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms