RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 LYZL2Q7Z4W2 148 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 OR2C3Q8N628 320 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 PDCD10Q9BUL8 212 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 C20orf85Q9H1P6 137 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 CACNG5Q9UF02 275 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 FBXL7Q9UJT9 491 aa20.77■□□□□ 0.92
SSU72-201ENST00000291386 C9orf170A2RU37 121 aa20.76■□□□□ 0.91
SSU72-201ENST00000291386 LINC01619G3V211 115 aa20.76■□□□□ 0.91
SSU72-201ENST00000291386 OR4E1P0C645 316 aa20.76■□□□□ 0.91
SSU72-201ENST00000291386 OR1L6Q8NGR2 347 aa20.76■□□□□ 0.91
SSU72-201ENST00000291386 PLEKHA3Q9HB20 300 aa20.76■□□□□ 0.91
SSU72-201ENST00000291386 RANGRFQ9HD47 186 aaPredicted RBP20.76■□□□□ 0.91
SSU72-201ENST00000291386 CACFD1Q9UGQ2 172 aa20.76■□□□□ 0.91
SSU72-201ENST00000291386 DMRT1Q9Y5R6 373 aa20.76■□□□□ 0.91
SSU72-201ENST00000291386 F11RQ9Y624 299 aaKnown RBP20.76■□□□□ 0.91
SSU72-201ENST00000291386 CYB5BO43169 146 aa20.75■□□□□ 0.91
SSU72-201ENST00000291386 MECP2P51608 486 aaKnown RBP20.75■□□□□ 0.91
SSU72-201ENST00000291386 RAB25P57735 213 aa20.75■□□□□ 0.91
SSU72-201ENST00000291386 C15orf32Q32M92 178 aa20.75■□□□□ 0.91
SSU72-201ENST00000291386 FAM209BQ5JX69 171 aa20.75■□□□□ 0.91
SSU72-201ENST00000291386 ZNF114Q8NC26 417 aa20.75■□□□□ 0.91
SSU72-201ENST00000291386 DPF1Q92782 380 aa20.75■□□□□ 0.91
SSU72-201ENST00000291386 THYN1Q9P016 225 aa20.75■□□□□ 0.91
SSU72-201ENST00000291386 IGHV4OR15-8A0A075B7B6 117 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 A0A087WW49 117 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 NDUFB8O95169 186 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 IFNA17P01571 189 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 HLA-AP01891 365 aaKnown RBP20.74■□□□□ 0.91
SSU72-201ENST00000291386 SULT1A3P0DMM9 295 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 SULT1A4P0DMN0 295 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 ANXA7P20073 488 aaKnown RBP20.74■□□□□ 0.91
SSU72-201ENST00000291386 SPCS3P61009 180 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 DHRS2Q13268 280 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 LYG2Q86SG7 212 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 RCC1LQ96I51 464 aaKnown RBP20.74■□□□□ 0.91
SSU72-201ENST00000291386 PEF1Q9UBV8 284 aaKnown RBP20.74■□□□□ 0.91
SSU72-201ENST00000291386 FBN3Q75N90 2809 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 NBEAL1Q6ZS30 2694 aa20.74■□□□□ 0.91
SSU72-201ENST00000291386 FAM240BA0A1B0GVZ2 78 aa20.73■□□□□ 0.91
SSU72-201ENST00000291386 DUS4LO95620 317 aaKnown RBP20.73■□□□□ 0.91
SSU72-201ENST00000291386 ERHP84090 104 aaKnown RBP20.73■□□□□ 0.91
SSU72-201ENST00000291386 EXOSC2Q13868 293 aaKnown RBP20.73■□□□□ 0.91
SSU72-201ENST00000291386 OR1P1Q8NH06 330 aa20.73■□□□□ 0.91
SSU72-201ENST00000291386 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.72■□□□□ 0.91
SSU72-201ENST00000291386 A0A1B0GU03 582 aa20.72■□□□□ 0.91
SSU72-201ENST00000291386 MFAP2P55001 183 aa20.72■□□□□ 0.91
SSU72-201ENST00000291386 SMCO1Q147U7 214 aa20.72■□□□□ 0.91
SSU72-201ENST00000291386 SAMD5Q5TGI4 173 aa20.72■□□□□ 0.91
SSU72-201ENST00000291386 TMED3Q9Y3Q3 217 aa20.72■□□□□ 0.91
SSU72-201ENST00000291386 SLC25A6P12236 298 aa20.71■□□□□ 0.91
SSU72-201ENST00000291386 CXorf58Q96LI9 332 aa20.71■□□□□ 0.91
SSU72-201ENST00000291386 MCRIP2Q9BUT9 160 aaKnown RBP20.71■□□□□ 0.91
SSU72-201ENST00000291386 NUDT15Q9NV35 164 aa20.71■□□□□ 0.91
SSU72-201ENST00000291386 ZP3P21754 424 aa20.7■□□□□ 0.9
SSU72-201ENST00000291386 C4orf46Q504U0 113 aa20.7■□□□□ 0.9
SSU72-201ENST00000291386 SPINK9Q5DT21 86 aa20.7■□□□□ 0.9
SSU72-201ENST00000291386 SLC25A24Q6NUK1 477 aa20.7■□□□□ 0.9
SSU72-201ENST00000291386 COQ8AQ8NI60 647 aa20.7■□□□□ 0.9
SSU72-201ENST00000291386 VN1R17PQ8TDU5 208 aa20.7■□□□□ 0.9
SSU72-201ENST00000291386 EEF1AKMT3Q96AZ1 226 aa20.7■□□□□ 0.9
SSU72-201ENST00000291386 NOTCH3Q9UM47 2321 aa20.7■□□□□ 0.9
SSU72-201ENST00000291386 ANKRD34BA5PLL1 514 aa20.69■□□□□ 0.9
SSU72-201ENST00000291386 IGLL1P15814 213 aa20.69■□□□□ 0.9
SSU72-201ENST00000291386 TRAV6A0A075B6T7 132 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 TRBV7-1A0A0A6YYK4 115 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 PITX3O75364 302 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 TRBV12-3P01733 135 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 HOXA1P49639 335 aaPredicted RBP20.68■□□□□ 0.9
SSU72-201ENST00000291386 SLURP1P55000 103 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 PVRIGQ6DKI7 326 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 DUSP18Q8NEJ0 188 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 DLX4Q92988 240 aaPredicted RBP20.68■□□□□ 0.9
SSU72-201ENST00000291386 ENY2Q9NPA8 101 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 HSPB7Q9UBY9 170 aa20.68■□□□□ 0.9
SSU72-201ENST00000291386 H2AFB2P0C5Z0 115 aa20.67■□□□□ 0.9
SSU72-201ENST00000291386 HOXD3P31249 432 aaPredicted RBP20.67■□□□□ 0.9
SSU72-201ENST00000291386 BSXQ3C1V8 233 aa20.67■□□□□ 0.9
SSU72-201ENST00000291386 MITD1Q8WV92 249 aa20.67■□□□□ 0.9
SSU72-201ENST00000291386 DCUN1D4Q92564 292 aa20.67■□□□□ 0.9
SSU72-201ENST00000291386 CCDC140Q96MF4 163 aa20.67■□□□□ 0.9
SSU72-201ENST00000291386 GPR61Q9BZJ8 451 aa20.67■□□□□ 0.9
SSU72-201ENST00000291386 MFSD2BA6NFX1 497 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 G3V4G9 280 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 SNCAP37840 140 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 DEFA1P59665 94 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 DEFA3P59666 94 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 OXLD1Q5BKU9 147 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 KPRPQ5T749 579 aaPredicted RBP20.66■□□□□ 0.9
SSU72-201ENST00000291386 GGNBP1Q5YKI7 109 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 ZNF502Q8TBZ5 544 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 ENKURQ8TC29 256 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 ATP6V0BQ99437 205 aa20.66■□□□□ 0.9
SSU72-201ENST00000291386 K7EIM0 57 aa20.65■□□□□ 0.9
SSU72-201ENST00000291386 OVOL1O14753 267 aa20.65■□□□□ 0.9
SSU72-201ENST00000291386 HOXB5P09067 269 aa20.65■□□□□ 0.9
SSU72-201ENST00000291386 SUB1P53999 127 aaKnown RBP eCLIP20.65■□□□□ 0.92e-8■■■■□ 19.7
SSU72-201ENST00000291386 TNFRSF9Q07011 255 aa20.65■□□□□ 0.9
SSU72-201ENST00000291386 KLF5Q13887 457 aaPredicted RBP20.65■□□□□ 0.9
SSU72-201ENST00000291386 OR1S1Q8NH92 325 aa20.65■□□□□ 0.9
SSU72-201ENST00000291386 BMPR1BO00238 502 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms