RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 VOPP1Q96AW1 172 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 GNPNAT1Q96EK6 184 aaPredicted RBP2.05□□□□□ -2.08
CHD1-201ENST00000284049 WDR61Q9GZS3 305 aaKnown RBP2.05□□□□□ -2.08
CHD1-201ENST00000284049 TRIP12Q14669 1992 aaPredicted RBP2.05□□□□□ -2.08
CHD1-201ENST00000284049 IGLV11-55A0A075B6I3 123 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 IGKV3D-15A0A087WSY6 115 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 TMED7-TICAM2A0A0A6YYA0 188 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 I3L521 148 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 NPIPB7O75200 414 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 IL4P05112 153 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 CTSLP07711 333 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 CTSEP14091 401 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 EIF2B2P49770 351 aaKnown RBP2.05□□□□□ -2.08
CHD1-201ENST00000284049 RPS28P62857 69 aaKnown RBP2.05□□□□□ -2.08
CHD1-201ENST00000284049 MYL5Q02045 173 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 CST6Q15828 149 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 MMGT1Q8N4V1 131 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 PACRGLQ8N7B6 248 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 RAB2BQ8WUD1 216 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 VSIG2Q96IQ7 327 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 RBM12B-AS1Q9P1G2 102 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 TRAPPC1Q9Y5R8 145 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 IGHV3-35A0A0C4DH35 117 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 TMEM189A5PLL7 270 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 TRAPPC13A5PLN9 417 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 GGT3PA6NGU5 568 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 DNASE2O00115 360 aaPredicted RBP2.05□□□□□ -2.08
CHD1-201ENST00000284049 UBBP0CG47 229 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 CNTFRP26992 372 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 SFXN4Q6P4A7 337 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 TIFABQ6ZNK6 161 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 MKXQ8IYA7 352 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 Q8N1X5 172 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 TERB2Q8NHR7 220 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 LITAFQ99732 161 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 ZNF649Q9BS31 505 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 LINC00597Q9H2U6 94 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 LRTM1Q9HBL6 345 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 PCTPQ9UKL6 214 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 CYSLTR1Q9Y271 337 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 A0A1B0GXF2 115 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 MYBPHLA2RUH7 354 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 OR5H14A6NHG9 310 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 CD5LO43866 347 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 HLA-DQB1P01920 261 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 SRP19P09132 144 aaKnown RBP2.05□□□□□ -2.08
CHD1-201ENST00000284049 PSG2P11465 335 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 CD200P41217 278 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 APOFQ13790 326 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 HES1Q14469 280 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 Q1RN00 199 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 SLC25A29Q8N8R3 303 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 CCL17Q92583 94 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 KLK6Q92876 244 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 L3HYPDHQ96EM0 354 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 PPP3R2Q96LZ3 170 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 LYSMD1Q96S90 227 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 KRTAP3-1Q9BYR8 98 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 ZNF581Q9P0T4 197 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 COL5A1P20908 1838 aaPredicted RBP2.05□□□□□ -2.08
CHD1-201ENST00000284049 CACNA1DQ01668 2161 aa2.05□□□□□ -2.08
CHD1-201ENST00000284049 EXOC1LA0A1B0GW35 172 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 A0A1W2PQ67 120 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 SH2D1AO60880 128 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 GGCTO75223 188 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 POLR2IP36954 125 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 PSPHP78330 225 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 BIKQ13323 160 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 NANOGP8Q6NSW7 305 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 ZNF705AQ6ZN79 300 aaPredicted RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 CTAGE3PQ8IX95 158 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 DAND5Q8N907 189 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 OR11H6Q8NGC7 330 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 NRTNQ99748 197 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 GABARAPL1Q9H0R8 117 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 LAMTOR2Q9Y2Q5 125 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TDRD15B5MCY1 1934 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 DOCK8Q8NF50 2099 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 IGHV1OR15-9A0A0B4J2B8 117 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 C1orf196B1AJZ1 125 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 OR7C2O60412 319 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 EPPINO95925 133 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 IGLV3-27P01718 113 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 ATP5G1P05496 136 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 METTL15P1P0C7V9 234 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 ACVRL1P37023 503 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 CKS1BP61024 79 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 HOXC5Q00444 222 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 KIAA0040Q15053 153 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 PCM1Q15154 2024 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 TMEM78Q5T7P6 136 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 EIF5AL1Q6IS14 154 aaKnown RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 CEMP1Q6PRD7 247 aaPredicted RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 LINC01551Q86U37 167 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 C17orf82Q86X59 251 aaPredicted RBP2.04□□□□□ -2.08
CHD1-201ENST00000284049 SGPP2Q8IWX5 399 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 OR1L1Q8NH94 360 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 GBF1Q92538 1859 aa2.04□□□□□ -2.08
CHD1-201ENST00000284049 ZNF556Q9HAH1 456 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms