RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ZNF616Q08AN1 781 aa8.87□□□□□ -0.99
GGPS1-201ENST00000282841 DYNAPQ8N1N2 210 aa8.87□□□□□ -0.99
GGPS1-201ENST00000282841 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.87□□□□□ -0.99
GGPS1-201ENST00000282841 LY6G5BQ8NDX9 201 aa8.87□□□□□ -0.99
GGPS1-201ENST00000282841 RAB24Q969Q5 203 aa8.87□□□□□ -0.99
GGPS1-201ENST00000282841 NUDT11Q96G61 164 aa8.87□□□□□ -0.99
GGPS1-201ENST00000282841 PACRGQ96M98 296 aaPredicted RBP8.87□□□□□ -0.99
GGPS1-201ENST00000282841 TCF19Q9Y242 345 aa8.87□□□□□ -0.99
GGPS1-201ENST00000282841 TAAR5O14804 337 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 SNAPC5O75971 98 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 APOA2P02652 100 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 PRH1P02810 166 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 REG1AP05451 166 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 OR5AN1Q8NGI8 311 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 FAM168AQ92567 244 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 RPEQ96AT9 228 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 RAB39BQ96DA2 213 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 NDUFAF3Q9BU61 184 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 BARX1Q9HBU1 254 aaPredicted RBP8.86□□□□□ -0.99
GGPS1-201ENST00000282841 OR51B2Q9Y5P1 312 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 FLNAP21333 2647 aaKnown RBP8.86□□□□□ -0.99
GGPS1-201ENST00000282841 BORCS7-ASMTA0A0B4J1R7 106 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 RBFOX2O43251 390 aaKnown RBP eCLIP8.86□□□□□ -0.99
GGPS1-201ENST00000282841 STAG3L3P0CL85 134 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 FOLR2P14207 255 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 LGALS4P56470 323 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 GNB1P62873 340 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 BLOC1S1P78537 153 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 MLANAQ16655 118 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 ZNF674Q2M3X9 581 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 HCP5Q6MZN7 132 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 OR10D4PQ8NGN7 298 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 OR2G3Q8NGZ4 309 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 TMEM170AQ8WVE7 144 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 SMIM8Q96KF7 97 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 VSIRQ9H7M9 311 aa8.86□□□□□ -0.99
GGPS1-201ENST00000282841 SOX21Q9Y651 276 aaPredicted RBP8.86□□□□□ -0.99
GGPS1-201ENST00000282841 IGHV1-3A0A0C4DH29 117 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 SMCO3A2RU48 225 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 RNASEK-C17orf49H0YIS7 233 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 PRRX1P54821 245 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 SLC38A11Q08AI6 406 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 Q6ZRG5 221 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 TCTEX1D1Q8N7M0 179 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 TMEM186Q96B77 213 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 SNHG12Q9BXW3 62 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 FAM96BQ9Y3D0 163 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 C15orf61A6NNL5 157 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 COLCA2A8K830 154 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 TIMM23O14925 209 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 HRASP01112 189 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 ELLP55199 621 aaPredicted RBP8.85□□□□□ -0.99
GGPS1-201ENST00000282841 FAM213BQ8TBF2 198 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 ADTRPQ96IZ2 230 aa8.85□□□□□ -0.99
GGPS1-201ENST00000282841 STRAPQ9Y3F4 350 aaKnown RBP8.85□□□□□ -0.99
GGPS1-201ENST00000282841 C15orf62A8K5M9 175 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 HMGB3O15347 200 aaKnown RBP8.84□□□□□ -0.99
GGPS1-201ENST00000282841 C8orf46Q8TAG6 207 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 RNF141Q8WVD5 230 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 ATP5SQ99766 215 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 VPS25Q9BRG1 176 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 GAR1Q9NY12 217 aaKnown RBP8.84□□□□□ -0.99
GGPS1-201ENST00000282841 TEX50A0A1B0GTY4 177 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 A0A1W2PPH5 198 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 TGOLN2O43493 480 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 GAPDHP04406 335 aaKnown RBP8.84□□□□□ -0.99
GGPS1-201ENST00000282841 ADCYAP1P18509 176 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 KIR2DS2P43631 304 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 FGF8P55075 233 aaPredicted RBP8.84□□□□□ -0.99
GGPS1-201ENST00000282841 F2RL1P55085 397 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 TMEM14EPQ6UXP3 125 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 PHYHIPLQ96FC7 376 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 ZNF430Q9H8G1 570 aaPredicted RBP8.84□□□□□ -0.99
GGPS1-201ENST00000282841 WASHC3Q9Y3C0 194 aa8.84□□□□□ -0.99
GGPS1-201ENST00000282841 hCG_1809904A0A1W2PP81 198 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 A0A1W2PPE2 198 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 A0A1W2PR64 198 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 A0A1W2PRV1 198 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 UPK2O00526 184 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 FCN1O00602 326 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 IGLV2-23P01705 113 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 PDLIM4P50479 330 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 HES1Q14469 280 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 LINC00311Q8N616 119 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 OR4C13Q8NGP0 309 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 GINS3Q9BRX5 216 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 FBXL15Q9H469 300 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 TMEM14BQ9NUH8 114 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 A0A1B0GW64 132 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 TMEM218A2RU14 115 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 M0QZK8 103 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 PHOX2AO14813 284 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 HTR1DP28221 377 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 VDAC2P45880 294 aaPredicted RBP8.83□□□□□ -1
GGPS1-201ENST00000282841 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 PMS2P5A8MQ11 134 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 A8MWP6 167 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 FAM90A26D6RGX4 464 aa8.83□□□□□ -1
GGPS1-201ENST00000282841 KBTBD11O94819 623 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms