RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 NRAPQ86VF7 1730 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 KBTBD11-OT1A0A1B0GTJ5 212 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 C5orf67F2Z3F1 127 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 RHOGP84095 191 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 WFDC6Q9BQY6 131 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 M0R2P5 195 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 TMEM86BQ8N661 226 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 SRXN1Q9BYN0 137 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 LAMB1P07942 1786 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 ITGB4P16144 1822 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 F2Z2F3 143 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 EGR4Q05215 589 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 IFI27L1Q96BM0 104 aa7.34□□□□□ -1.23
SCUBE3-201ENST00000274938 C1QTNF9P0C862 333 aa7.34□□□□□ -1.24
SCUBE3-201ENST00000274938 COX6B1P14854 86 aa7.34□□□□□ -1.24
SCUBE3-201ENST00000274938 EIF4EBP2Q13542 120 aaPredicted RBP7.34□□□□□ -1.24
SCUBE3-201ENST00000274938 ZNF562Q6V9R5 426 aa7.34□□□□□ -1.24
SCUBE3-201ENST00000274938 PPP1R27Q86WC6 154 aa7.34□□□□□ -1.24
SCUBE3-201ENST00000274938 ZNF784Q8NCA9 323 aaPredicted RBP7.34□□□□□ -1.24
SCUBE3-201ENST00000274938 TRAV2A0A0B4J234 112 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 TRAV12-3A0A0B4J271 114 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 CRYBA2P53672 197 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 DCTN5Q9BTE1 182 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 SPANXDQ9BXN6 97 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 MYO5AQ9Y4I1 1855 aaKnown RBP7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 A0A1W2PQF6 199 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 DUSP14O95147 198 aaKnown RBP7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 TMEM42Q69YG0 159 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 ARPC1AQ92747 370 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 BTAF1O14981 1849 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 TEX38Q6PEX7 206 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 GTF3AQ92664 365 aaKnown RBP7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 LAMA4Q16363 1823 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 SHISA3A0PJX4 238 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 UPK2O00526 184 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 LINC00271P0C7V0 271 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 CENPVQ7Z7K6 275 aaPredicted RBP7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 TRBV6-7A0A0A0MS04 114 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 CRPP02741 224 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 LURAP1LQ8IV03 231 aa7.33□□□□□ -1.24
SCUBE3-201ENST00000274938 GLRXP35754 106 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 STARD6P59095 220 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 FOXL1Q12952 345 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 PLEKHB2Q96CS7 222 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 RNASE7Q9H1E1 156 aaKnown RBP7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 IGFBP3P17936 291 aaPredicted RBP7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 RNASE4P34096 147 aaKnown RBP7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 C1orf162Q8NEQ5 155 aaPredicted RBP7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 TRGV11A0A075B6L2 103 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 TBX6O95947 436 aaPredicted RBP7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 ESDP10768 282 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 MALP21145 153 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 FAM166AQ6J272 317 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 HS3ST3B1Q9Y662 390 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 AMBPP02760 352 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 CD5P06127 495 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 LY6EQ16553 131 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 Q6ZT83 130 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 FBXL15Q9H469 300 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 MYOD1P15172 320 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 SLC25A48Q6ZT89 311 aaKnown RBP7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 CFHR5Q9BXR6 569 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 PSG8Q9UQ74 426 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 LINC00312Q9Y6C7 94 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 TRAV1-1A0A0B4J248 108 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 COX6A1P12074 109 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 C1QTNF5Q9BXJ0 243 aa7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 URB1O60287 2271 aaKnown RBP7.32□□□□□ -1.24
SCUBE3-201ENST00000274938 C15orf61A6NNL5 157 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 IGKV3-20P01619 116 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 IGHV3-48P01763 117 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 LINC01587Q99440 93 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 PEMTQ9UBM1 199 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 TRPM3Q9HCF6 1732 aaPredicted RBP7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 TCRBV4S1A1TA0A5B7 111 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 COLCA2A8K830 154 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 CELA2AP08217 269 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 OR13A1Q8NGR1 328 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 GZMBP10144 247 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 CD28P10747 220 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 CSRP3P50461 194 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 WBP1LQ9NX94 342 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 BTCP35070 178 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 ID3Q02535 119 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 LY6G6FQ5SQ64 297 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 C1QL2Q7Z5L3 287 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 PF4P02776 101 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 DLX4Q92988 240 aaPredicted RBP7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 JMJD8Q96S16 334 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 WDR83OSQ9Y284 106 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 LY96Q9Y6Y9 160 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 EFEMP2O95967 443 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 NAPSAO96009 420 aa7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 APOBEC3AP31941 199 aaPredicted RBP7.31□□□□□ -1.24
SCUBE3-201ENST00000274938 YPEL1O60688 119 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 TOMM40O96008 361 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 PCOLCEQ15113 449 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 OCC1Q8TAD7 63 aa7.3□□□□□ -1.24
SCUBE3-201ENST00000274938 YPEL2Q96QA6 119 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms