RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 SSX2Q16385 188 aa11.65□□□□□ -0.55
TRIM23-202ENST00000274327 GUK1Q16774 197 aa11.65□□□□□ -0.55
TRIM23-202ENST00000274327 VWC2Q2TAL6 325 aa11.65□□□□□ -0.55
TRIM23-202ENST00000274327 LRRC75BQ2VPJ9 315 aa11.65□□□□□ -0.55
TRIM23-202ENST00000274327 C1QL4Q86Z23 238 aa11.65□□□□□ -0.55
TRIM23-202ENST00000274327 HIST1H2BAQ96A08 127 aa11.65□□□□□ -0.55
TRIM23-202ENST00000274327 MBD6Q96DN6 1003 aa11.65□□□□□ -0.55
TRIM23-202ENST00000274327 SIGLEC9Q9Y336 463 aa11.65□□□□□ -0.55
TRIM23-202ENST00000274327 TENM4Q6N022 2769 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 CENPVL3A0A0U1RRI6 287 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 E7EUB6 86 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 EBI3Q14213 229 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 PRSS8Q16651 343 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 BSXQ3C1V8 233 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 MMD2Q8IY49 270 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 SLC24A4Q8NFF2 622 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 GNPNAT1Q96EK6 184 aaPredicted RBP11.64□□□□□ -0.55
TRIM23-202ENST00000274327 TMEM147Q9BVK8 224 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 SCRT1Q9BWW7 348 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 HINT2Q9BX68 163 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 SLC35B3Q9H1N7 401 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 VPS13CQ709C8 3753 aa11.64□□□□□ -0.55
TRIM23-202ENST00000274327 ANKRD17O75179 2603 aaKnown RBP11.63□□□□□ -0.55
TRIM23-202ENST00000274327 B4DSR2 109 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 NPFFO15130 113 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 MOSP00540 346 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 IGKV1D-33P01593 117 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 IGKV1-33P01594 117 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 NPY1RP25929 384 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 CAMLGP49069 296 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 NPBQ8NG41 125 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 EAF1Q96JC9 268 aaPredicted RBP11.63□□□□□ -0.55
TRIM23-202ENST00000274327 WDR61Q9GZS3 305 aaKnown RBP11.63□□□□□ -0.55
TRIM23-202ENST00000274327 RFNGQ9Y644 331 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 PTPN13Q12923 2485 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 A0A1W2PN81 502 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 NDUFA3O95167 84 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 CA2P00918 260 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 CHRNA7P36544 502 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 ATP5IP56385 69 aaPredicted RBP11.63□□□□□ -0.55
TRIM23-202ENST00000274327 RAB11AP62491 216 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 RUNX1Q01196 453 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 ETV3LQ6ZN32 361 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 LURAP1LQ8IV03 231 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 Q8N6K4 173 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 OR2T10Q8NGZ9 312 aa11.63□□□□□ -0.55
TRIM23-202ENST00000274327 ASH1LQ9NR48 2969 aaKnown RBP11.62□□□□□ -0.55
TRIM23-202ENST00000274327 C7orf77A4D0Y5 90 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 SNRNP70P08621 437 aaKnown RBP11.62□□□□□ -0.55
TRIM23-202ENST00000274327 MDKP21741 143 aaPredicted RBP11.62□□□□□ -0.55
TRIM23-202ENST00000274327 SAA4P35542 130 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 PPT1P50897 306 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 LOXL1Q08397 574 aaPredicted RBP11.62□□□□□ -0.55
TRIM23-202ENST00000274327 FBLN7Q53RD9 439 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 C2orf83Q53S99 150 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 AWAT1Q58HT5 328 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 HIST2H2BCQ6DN03 193 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 SLC25A24Q6NUK1 477 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 DPPA3Q6W0C5 159 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 PPP1R27Q86WC6 154 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 OR10W1Q8NGF6 305 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 OR2G3Q8NGZ4 309 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 SCGB1C1Q8TD33 95 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 GGACTQ9BVM4 153 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 FBXL15Q9H469 300 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 RPS10P5Q9NQ39 176 aa11.62□□□□□ -0.55
TRIM23-202ENST00000274327 TRAV20A0A0B4J274 112 aa11.61□□□□□ -0.55
TRIM23-202ENST00000274327 UBE2L5PA0A1B0GUS4 154 aa11.61□□□□□ -0.55
TRIM23-202ENST00000274327 C9JQL5 133 aa11.61□□□□□ -0.55
TRIM23-202ENST00000274327 NBR2O15453 112 aa11.61□□□□□ -0.55
TRIM23-202ENST00000274327 PLXNB1O43157 2135 aa11.61□□□□□ -0.55
TRIM23-202ENST00000274327 EIF3GO75821 320 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIM23-202ENST00000274327 RNASE2P10153 161 aaKnown RBP11.61□□□□□ -0.55
TRIM23-202ENST00000274327 DLK1P80370 383 aa11.61□□□□□ -0.55
TRIM23-202ENST00000274327 TMEM182Q6ZP80 229 aaPredicted RBP11.61□□□□□ -0.55
TRIM23-202ENST00000274327 TAF15Q92804 592 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIM23-202ENST00000274327 PSMG3Q9BT73 122 aaPredicted RBP11.61□□□□□ -0.55
TRIM23-202ENST00000274327 CELSR2Q9HCU4 2923 aa11.61□□□□□ -0.55
TRIM23-202ENST00000274327 IGHV1-69DA0A0B4J2H0 117 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 IGHV1-69P01742 117 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 RAB5AP20339 215 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 GATA3P23771 443 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 RPL27AP46776 148 aaKnown RBP11.6□□□□□ -0.55
TRIM23-202ENST00000274327 COMPP49747 757 aaPredicted RBP11.6□□□□□ -0.55
TRIM23-202ENST00000274327 SSBP2P81877 361 aaPredicted RBP11.6□□□□□ -0.55
TRIM23-202ENST00000274327 MMDQ15546 238 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 Q5PR19 223 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 PRSS57Q6UWY2 283 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 CENPVQ7Z7K6 275 aaPredicted RBP11.6□□□□□ -0.55
TRIM23-202ENST00000274327 KRTAP1-3Q8IUG1 177 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 LINC01356Q8N9X3 169 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 TIMM9Q9Y5J7 89 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 A0A087WWC5 75 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 CD24P25063 80 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 ERHP84090 104 aaKnown RBP11.6□□□□□ -0.55
TRIM23-202ENST00000274327 WT1-ASQ06250 92 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 ZNF616Q08AN1 781 aa11.6□□□□□ -0.55
TRIM23-202ENST00000274327 HNF4GQ14541 408 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms