RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PRRC2AP48634 2157 aaKnown RBP7.55□□□□□ -1.2
SSR3-201ENST00000265044 C15orf62A8K5M9 175 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 MPDU1O75352 247 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 IGHV2-5P01817 119 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 GATA2P23769 480 aaPredicted RBP7.55□□□□□ -1.2
SSR3-201ENST00000265044 RHOBP62745 196 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 Q56UQ5 140 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 ZNF841Q6ZN19 808 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 BEND2Q8NDZ0 799 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 OR4P4Q8NGL7 312 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 SRSF12Q8WXF0 261 aaKnown RBP7.55□□□□□ -1.2
SSR3-201ENST00000265044 RAB24Q969Q5 203 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 NKX6-2Q9C056 277 aaPredicted RBP7.55□□□□□ -1.2
SSR3-201ENST00000265044 SLC35B3Q9H1N7 401 aa7.55□□□□□ -1.2
SSR3-201ENST00000265044 SETD2Q9BYW2 2564 aaPredicted RBP7.55□□□□□ -1.2
SSR3-201ENST00000265044 CTXND1A0A1B0GTU2 59 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 ZNF727A8MUV8 499 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 NBR2O15453 112 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 FAM157CP0CG43 387 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 TAS2R45P59539 299 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 VSIRQ9H7M9 311 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 THYN1Q9P016 225 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 KLF2Q9Y5W3 355 aaPredicted RBP7.54□□□□□ -1.2
SSR3-201ENST00000265044 FLNCQ14315 2725 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 RELNP78509 3460 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 FGF16O43320 207 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 IGFBP2P18065 325 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 ZFP36P26651 326 aaKnown RBP7.54□□□□□ -1.2
SSR3-201ENST00000265044 BPIFB3P59826 476 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 DLK1P80370 383 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 PSG5Q15238 335 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 MLANAQ16655 118 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 SLC16A13Q7RTY0 426 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 STPG2Q8N412 459 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 TMEM167AQ8TBQ9 72 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 RCC1LQ96I51 464 aaKnown RBP7.54□□□□□ -1.2
SSR3-201ENST00000265044 RARRES2Q99969 163 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 PSMG3Q9BT73 122 aaPredicted RBP7.54□□□□□ -1.2
SSR3-201ENST00000265044 HIF1ANQ9NWT6 349 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 ZNF257Q9Y2Q1 563 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 S4R3C0 116 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 TEX45Q8NA69 505 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 OR1B1Q8NGR6 318 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 OR4X1Q8NH49 305 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 OR2T6Q8NHC8 308 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 DDB2Q92466 427 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 TPSG1Q9NRR2 321 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 TMEM14BQ9NUH8 114 aa7.54□□□□□ -1.2
SSR3-201ENST00000265044 GNG7O60262 68 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 SAA4P35542 130 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
SSR3-201ENST00000265044 ADIRFQ15847 76 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 PRSS8Q16651 343 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 SLC35E3Q7Z769 313 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 SIGLEC9Q9Y336 463 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 ABCA2Q9BZC7 2435 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 IGHV4-61A0A0C4DH41 118 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 PAGE4O60829 102 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 LINC00869P0C866 280 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 TAGLN2P37802 199 aaKnown RBP7.53□□□□□ -1.2
SSR3-201ENST00000265044 LYZP61626 148 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 FAM71F2Q6NXP2 309 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 OR4A5Q8NH83 315 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 EAF1Q96JC9 268 aaPredicted RBP7.53□□□□□ -1.2
SSR3-201ENST00000265044 SMIM7Q9BQ49 75 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 MLXQ9UH92 298 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 IGHV2-70DA0A0C4DH43 119 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 A0A0U1RQK1 487 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 SMAD7O15105 426 aaKnown RBP7.53□□□□□ -1.2
SSR3-201ENST00000265044 GCSAMLQ5JQS6 135 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 STPG3Q8N7X2 389 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 UHRF2Q96PU4 802 aa7.53□□□□□ -1.2
SSR3-201ENST00000265044 IGHV4-30-2A0A087WSY4 118 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 J3QKU1 62 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 VENTXO95231 258 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 FABP1P07148 127 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 HAPLN4Q86UW8 402 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 URGCP-MRPS24S4R325 110 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 NDUFS8O00217 210 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 FBP1P09467 338 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 NPBWR1P48145 328 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 CCL20P78556 96 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 GUCA2BQ16661 112 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 DPPA3Q6W0C5 159 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 RITA1Q96K30 269 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 GGACTQ9BVM4 153 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 LINC00574Q9H8X3 128 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 WDR83OSQ9Y284 106 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 B4DSR2 109 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 IGLV1-47P01700 117 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 RHEBQ15382 184 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 RUSC1-AS1Q66K80 236 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 TMEM219Q86XT9 240 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 RBM14Q96PK6 669 aaKnown RBP7.52□□□□□ -1.21
SSR3-201ENST00000265044 SPOCK3Q9BQ16 436 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
SSR3-201ENST00000265044 TANC2Q9HCD6 1990 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms