RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 PRSS57Q6UWY2 283 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 ZNF841Q6ZN19 808 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 ZNF645Q8N7E2 425 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 OR2T6Q8NHC8 308 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 ZNF488Q96MN9 340 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 SAP30LQ9HAJ7 183 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 A0A087X0K7 114 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 J3QW42 95 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 ISLRO14498 428 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 HIST1H1AQ02539 215 aaPredicted RBP10.85□□□□□ -0.67
NUP54-201ENST00000264883 KLF5Q13887 457 aaPredicted RBP10.85□□□□□ -0.67
NUP54-201ENST00000264883 Q5PR19 223 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 IBA57Q5T440 356 aaKnown RBP10.85□□□□□ -0.67
NUP54-201ENST00000264883 MGST2Q99735 147 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 RTL8AQ9BWD3 113 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 GTF3C1Q12789 2109 aa10.85□□□□□ -0.67
NUP54-201ENST00000264883 GNG7O60262 68 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 RFPL3SP0C7P2 107 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 AREGP15514 252 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 GPR6P46095 362 aaPredicted RBP10.84□□□□□ -0.67
NUP54-201ENST00000264883 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 H2BFWTQ7Z2G1 175 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 GGTLC1Q9BX51 225 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 FNDC4Q9H6D8 234 aaPredicted RBP10.84□□□□□ -0.67
NUP54-201ENST00000264883 DIDO1Q9BTC0 2240 aaKnown RBP10.84□□□□□ -0.67
NUP54-201ENST00000264883 ZNF407Q9C0G0 2248 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 FAM231BA6NCW3 169 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 FOXH1O75593 365 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 HLA-DRB1P01911 266 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 GABRA6Q16445 453 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 RNFT1Q5M7Z0 435 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 SPATA31B1PQ5VZV4 182 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 KCNIP1Q9NZI2 227 aa10.84□□□□□ -0.67
NUP54-201ENST00000264883 CRXO43186 299 aaPredicted RBP10.83□□□□□ -0.68
NUP54-201ENST00000264883 MGST1P10620 155 aaKnown RBP10.83□□□□□ -0.68
NUP54-201ENST00000264883 REG1BP48304 166 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 CYB561P49447 251 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 RPL30P62888 115 aaKnown RBP10.83□□□□□ -0.68
NUP54-201ENST00000264883 RPL8P62917 257 aaKnown RBP10.83□□□□□ -0.68
NUP54-201ENST00000264883 WDR31Q8NA23 367 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 WIPF2Q8TF74 440 aaPredicted RBP10.83□□□□□ -0.68
NUP54-201ENST00000264883 PRRG4Q9BZD6 226 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 C1RLQ9NZP8 487 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 B4GALT7Q9UBV7 327 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 LOXL2Q9Y4K0 774 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 OR51B2Q9Y5P1 312 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 A0A096LPE4 126 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 A0A1W2PPZ6 126 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 SYS1-DBNDD2H3BUS1 97 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 NEURL1O76050 574 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 CGAP01215 116 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 GPR183P32249 361 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 RASL11AQ6T310 242 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 AP1S3Q96PC3 154 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 MS4A5Q9H3V2 200 aa10.83□□□□□ -0.68
NUP54-201ENST00000264883 PCNX2A6NKB5 2137 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 DLL1O00548 723 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 OR2H2O95918 312 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 CA1P00915 261 aaPredicted RBP10.82□□□□□ -0.68
NUP54-201ENST00000264883 IGHV3-9P01782 118 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 ERVK11-1P61568 191 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 ZNF146Q15072 292 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 EFNB3Q15768 340 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 SSMEM1Q8WWF3 244 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 NANOS1Q8WY41 292 aaKnown RBP10.82□□□□□ -0.68
NUP54-201ENST00000264883 TAAR6Q96RI8 345 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 TMEM191AQ9H0A3 160 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 HAND1O96004 215 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 NGFP01138 241 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 PPIAL4GP0DN37 164 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 CCL2P13500 99 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 CA6P23280 308 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 FAM120AOSQ5T036 256 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 TMEM108Q6UXF1 575 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 NEGR1Q7Z3B1 354 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 ZNF808Q8N4W9 903 aaPredicted RBP10.82□□□□□ -0.68
NUP54-201ENST00000264883 SPRY4Q9C004 299 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 NPVFQ9HCQ7 196 aa10.82□□□□□ -0.68
NUP54-201ENST00000264883 EP300Q09472 2414 aaPredicted RBP10.81□□□□□ -0.68
NUP54-201ENST00000264883 A0A1W2PNU3 283 aaPredicted RBP10.81□□□□□ -0.68
NUP54-201ENST00000264883 SPINK2P20155 84 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 EIF4EBP1Q13541 118 aaPredicted RBP10.81□□□□□ -0.68
NUP54-201ENST00000264883 PPP1R32Q7Z5V6 425 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 ABI3Q9P2A4 366 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 SELENOKQ9Y6D0 94 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 SH2D7A6NKC9 451 aaPredicted RBP10.81□□□□□ -0.68
NUP54-201ENST00000264883 PPIAL4DF5H284 164 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 SCGB1A1P11684 91 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 COL8A2P25067 703 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 MFAP2P55001 183 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 GDF5OSQ5U4N7 250 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 TUSC5Q8IXB3 177 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 GALMQ96C23 342 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 FAM173AQ9BQD7 235 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 ZNF835Q9Y2P0 537 aa10.81□□□□□ -0.68
NUP54-201ENST00000264883 TMEM30CPA0ZSE6 113 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms