RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SCN8AQ9UQD0 1980 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 UPK2O00526 184 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 SRP19P09132 144 aaKnown RBP11.68□□□□□ -0.54
CDH3-201ENST00000264012 RNF224P0DH78 156 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 SRSF6Q13247 344 aaKnown RBP11.68□□□□□ -0.54
CDH3-201ENST00000264012 ZNF407Q9C0G0 2248 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 TRGV3P03979 118 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 AMY1AP04745 511 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 PLAURQ03405 335 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 CBLN4Q9NTU7 201 aa11.68□□□□□ -0.54
CDH3-201ENST00000264012 FOXA2Q9Y261 457 aaPredicted RBP11.68□□□□□ -0.54
CDH3-201ENST00000264012 C19orf67A6NJJ6 358 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDH3-201ENST00000264012 RNF144BQ7Z419 303 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 RNASEH2CQ8TDP1 164 aaKnown RBP11.67□□□□□ -0.54
CDH3-201ENST00000264012 TMEM133Q9H2Q1 129 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 FBXL7Q9UJT9 491 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 F8VVB4 439 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 F8VWA3 439 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 IGHV3-23P01764 117 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 CD99P14209 185 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 RPS20P60866 119 aaKnown RBP11.67□□□□□ -0.54
CDH3-201ENST00000264012 LY6DQ14210 128 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 ICAM4Q14773 271 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 TBR1Q16650 682 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 KIAA1644Q3SXP7 199 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 ZNF841Q6ZN19 808 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 C21orf62Q9NYP8 219 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 ANOS1P23352 680 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 GATA2P23769 480 aaPredicted RBP11.67□□□□□ -0.54
CDH3-201ENST00000264012 DUTP33316 252 aaKnown RBP11.67□□□□□ -0.54
CDH3-201ENST00000264012 GPX4P36969 197 aaPredicted RBP11.67□□□□□ -0.54
CDH3-201ENST00000264012 CX3CL1P78423 397 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 MBNL2Q5VZF2 373 aaKnown RBP11.67□□□□□ -0.54
CDH3-201ENST00000264012 TRGC1P0CF51 173 aa11.67□□□□□ -0.54
CDH3-201ENST00000264012 C15orf61A6NNL5 157 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 FGF16O43320 207 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 OTX1P32242 354 aaPredicted RBP11.66□□□□□ -0.54
CDH3-201ENST00000264012 RNFT1Q5M7Z0 435 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 ARPC1AQ92747 370 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 WNK2Q9Y3S1 2297 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 SRIP30626 198 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 TMEM42Q69YG0 159 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 TMEM144Q7Z5S9 345 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 LRTM2Q8N967 370 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 SLC25A15Q9Y619 301 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 HEATR1Q9H583 2144 aaKnown RBP11.66□□□□□ -0.54
CDH3-201ENST00000264012 PCNX1Q96RV3 2341 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 PSPNO60542 156 aa11.66□□□□□ -0.54
CDH3-201ENST00000264012 IFITM10A6NMD0 228 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 SELLP14151 372 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 DLX6P56179 175 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 CENPVQ7Z7K6 275 aaPredicted RBP11.65□□□□□ -0.54
CDH3-201ENST00000264012 PPP1R27Q86WC6 154 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 CLDND2Q8NHS1 167 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 GBF1Q92538 1859 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 SRSF7Q16629 238 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDH3-201ENST00000264012 NEU1Q99519 415 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 C7orf69Q9H7B7 122 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 FER1L5A0AVI2 2057 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 SIAH2O43255 324 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 CD55P08174 381 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 ATP5G3P48201 142 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 OR4D5Q8NGN0 318 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 SUPT4H1P63272 117 aaKnown RBP11.65□□□□□ -0.54
CDH3-201ENST00000264012 MIR17HGQ75NE6 70 aa11.65□□□□□ -0.54
CDH3-201ENST00000264012 A0A087WWC5 75 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 NAPSAO96009 420 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 GPX1P07203 203 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 RPL13AP40429 203 aaKnown RBP11.64□□□□□ -0.55
CDH3-201ENST00000264012 OR52E5Q8NH55 327 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 WNT10AQ9GZT5 417 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 NOTCH4Q99466 2003 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 BTF3P20290 206 aaKnown RBP11.64□□□□□ -0.55
CDH3-201ENST00000264012 ABCA4P78363 2273 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 LY6G6EA0A0G2JKS1 128 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 SCO2A0A1W2PP80 73 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 FOXI3A8MTJ6 420 aaPredicted RBP11.64□□□□□ -0.55
CDH3-201ENST00000264012 NBR2O15453 112 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 HOXA5P20719 270 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 GPR183P32249 361 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 SAPCD1Q5SSQ6 148 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 DDB2Q92466 427 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
CDH3-201ENST00000264012 AUP1Q9Y679 476 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 U3KQA8 63 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 HAX1O00165 279 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 LILRA1O75019 489 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 IGHG3P01860 377 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 FOXL2NBQ6ZUU3 175 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 SYT8Q8NBV8 401 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 ZFP30Q9Y2G7 519 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 MPDZO75970 2070 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 DOCK7Q96N67 2140 aa11.64□□□□□ -0.55
CDH3-201ENST00000264012 THBDP07204 575 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 C2orf83Q53S99 150 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 KIAA2026Q5HYC2 2103 aa11.63□□□□□ -0.55
CDH3-201ENST00000264012 TMEM183AQ8IXX5 376 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms