RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 ACTR3CQ9C0K3 210 aaPredicted RBP22.26■■□□□ 1.15
CCM2-201ENST00000258781 ZFP36P26651 326 aaKnown RBP22.25■■□□□ 1.15
CCM2-201ENST00000258781 ICAM4Q14773 271 aa22.25■■□□□ 1.15
CCM2-201ENST00000258781 MRGPRG-AS1Q2M3A8 158 aa22.25■■□□□ 1.15
CCM2-201ENST00000258781 KHDC3LQ587J8 217 aa22.25■■□□□ 1.15
CCM2-201ENST00000258781 MMD2Q8IY49 270 aa22.25■■□□□ 1.15
CCM2-201ENST00000258781 PERPQ96FX8 193 aa22.25■■□□□ 1.15
CCM2-201ENST00000258781 MGST2Q99735 147 aa22.25■■□□□ 1.15
CCM2-201ENST00000258781 HSPB1P04792 205 aaKnown RBP22.24■■□□□ 1.15
CCM2-201ENST00000258781 GGTLC1Q9BX51 225 aa22.24■■□□□ 1.15
CCM2-201ENST00000258781 TPSG1Q9NRR2 321 aa22.24■■□□□ 1.15
CCM2-201ENST00000258781 LOC102723971A0A1B0GUV8 181 aa22.24■■□□□ 1.15
CCM2-201ENST00000258781 CGB1A6NKQ9 187 aa22.24■■□□□ 1.15
CCM2-201ENST00000258781 PSG5Q15238 335 aa22.24■■□□□ 1.15
CCM2-201ENST00000258781 CYB5BO43169 146 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 MAS1LP35410 378 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 PDLIM4P50479 330 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 PAX2Q02962 417 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 PRSS8Q16651 343 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 LDLRAD2Q5SZI1 272 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 TEPPQ6URK8 271 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.23■■□□□ 1.15
CCM2-201ENST00000258781 C1orf159Q96HA4 380 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 GNG13Q9P2W3 67 aa22.23■■□□□ 1.15
CCM2-201ENST00000258781 E7EUB6 86 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 FGF8P55075 233 aaPredicted RBP22.22■■□□□ 1.15
CCM2-201ENST00000258781 KLRD1Q13241 179 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 SLC25A22Q9H936 323 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 SVEP1Q4LDE5 3571 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 SEC14L6B5MCN3 397 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 DNASE2O00115 360 aaPredicted RBP22.22■■□□□ 1.15
CCM2-201ENST00000258781 LMO4P61968 165 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 RAB31Q13636 194 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 C10orf55Q5SWW7 151 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 VMO1Q7Z5L0 202 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 SIGLEC9Q9Y336 463 aa22.22■■□□□ 1.15
CCM2-201ENST00000258781 IFNA1P01562 189 aa22.21■■□□□ 1.15
CCM2-201ENST00000258781 SRP19P09132 144 aaKnown RBP22.21■■□□□ 1.15
CCM2-201ENST00000258781 BCL2P10415 239 aa22.21■■□□□ 1.15
CCM2-201ENST00000258781 NPBWR1P48145 328 aa22.21■■□□□ 1.15
CCM2-201ENST00000258781 FAM122CQ6P4D5 195 aa22.21■■□□□ 1.15
CCM2-201ENST00000258781 MRPL41Q8IXM3 137 aaKnown RBP22.21■■□□□ 1.15
CCM2-201ENST00000258781 CLRN3Q8NCR9 226 aa22.21■■□□□ 1.15
CCM2-201ENST00000258781 TMA7Q9Y2S6 64 aaKnown RBP22.21■■□□□ 1.15
CCM2-201ENST00000258781 PXMP4Q9Y6I8 212 aa22.21■■□□□ 1.15
CCM2-201ENST00000258781 IGHV2-70DA0A0C4DH43 119 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 TIMM23O14925 209 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 PAX1P15863 534 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 WT1-ASQ06250 92 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 HABP2Q14520 560 aaPredicted RBP22.2■■□□□ 1.14
CCM2-201ENST00000258781 SIRPDQ9H106 197 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 NAV2Q8IVL1 2488 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 CNTFRP26992 372 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 SUB1P53999 127 aaKnown RBP eCLIP22.2■■□□□ 1.14
CCM2-201ENST00000258781 RXFP4Q8TDU9 374 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 FAM168AQ92567 244 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 RAB24Q969Q5 203 aa22.2■■□□□ 1.14
CCM2-201ENST00000258781 OR13C7P0DN81 318 aa22.19■■□□□ 1.14
CCM2-201ENST00000258781 CDC34P49427 236 aaPredicted RBP22.19■■□□□ 1.14
CCM2-201ENST00000258781 LCN2P80188 198 aa22.19■■□□□ 1.14
CCM2-201ENST00000258781 SOHLH1Q5JUK2 328 aa22.19■■□□□ 1.14
CCM2-201ENST00000258781 TMEM144Q7Z5S9 345 aa22.19■■□□□ 1.14
CCM2-201ENST00000258781 CACNG8Q8WXS5 425 aa22.19■■□□□ 1.14
CCM2-201ENST00000258781 METTL1Q9UBP6 276 aaKnown RBP22.19■■□□□ 1.14
CCM2-201ENST00000258781 ABCA2Q9BZC7 2435 aa22.18■■□□□ 1.14
CCM2-201ENST00000258781 ACTL6BO94805 426 aa22.18■■□□□ 1.14
CCM2-201ENST00000258781 YIF1AO95070 293 aa22.18■■□□□ 1.14
CCM2-201ENST00000258781 VENTXO95231 258 aa22.18■■□□□ 1.14
CCM2-201ENST00000258781 GPX4P36969 197 aaPredicted RBP22.18■■□□□ 1.14
CCM2-201ENST00000258781 CD69Q07108 199 aa22.18■■□□□ 1.14
CCM2-201ENST00000258781 C10orf105Q8TEF2 133 aa22.18■■□□□ 1.14
CCM2-201ENST00000258781 CFHR4Q92496 578 aa22.18■■□□□ 1.14
CCM2-201ENST00000258781 FAM74A7A6NL05 159 aa22.17■■□□□ 1.14
CCM2-201ENST00000258781 ZFP92A6NM28 416 aa22.17■■□□□ 1.14
CCM2-201ENST00000258781 OOSP1A8MZH6 123 aa22.17■■□□□ 1.14
CCM2-201ENST00000258781 HOXB4P17483 251 aaPredicted RBP22.17■■□□□ 1.14
CCM2-201ENST00000258781 RPL27AP46776 148 aaKnown RBP22.17■■□□□ 1.14
CCM2-201ENST00000258781 RPL29P47914 159 aaKnown RBP22.17■■□□□ 1.14
CCM2-201ENST00000258781 FAM74A3Q4VXF1 159 aa22.17■■□□□ 1.14
CCM2-201ENST00000258781 MIC13Q5XKP0 118 aa22.17■■□□□ 1.14
CCM2-201ENST00000258781 PPP1R27Q86WC6 154 aa22.17■■□□□ 1.14
CCM2-201ENST00000258781 RNASEH2CQ8TDP1 164 aaKnown RBP22.17■■□□□ 1.14
CCM2-201ENST00000258781 MINOS1Q5TGZ0 78 aa22.17■■□□□ 1.14
CCM2-201ENST00000258781 RBMS3Q6XE24 437 aaKnown RBP22.17■■□□□ 1.14
CCM2-201ENST00000258781 MINOS1-NBL1R4GNA1 71 aa22.17■■□□□ 1.14
CCM2-201ENST00000258781 COMPP49747 757 aaPredicted RBP22.16■■□□□ 1.14
CCM2-201ENST00000258781 TNXAQ16473 311 aa22.16■■□□□ 1.14
CCM2-201ENST00000258781 TMEM249Q2WGJ8 235 aa22.16■■□□□ 1.14
CCM2-201ENST00000258781 LHFPL4Q7Z7J7 247 aa22.16■■□□□ 1.14
CCM2-201ENST00000258781 PIMREGQ9BSJ6 248 aa22.16■■□□□ 1.14
CCM2-201ENST00000258781 VAX2Q9UIW0 290 aa22.16■■□□□ 1.14
CCM2-201ENST00000258781 FOXH1O75593 365 aa22.15■■□□□ 1.14
CCM2-201ENST00000258781 TAGLN2P37802 199 aaKnown RBP22.15■■□□□ 1.14
CCM2-201ENST00000258781 GAMTQ14353 236 aa22.15■■□□□ 1.14
CCM2-201ENST00000258781 CCDC144NLQ6NUI1 221 aa22.15■■□□□ 1.14
CCM2-201ENST00000258781 CLEC2AQ6UVW9 174 aa22.15■■□□□ 1.14
CCM2-201ENST00000258781 P2RX4Q99571 388 aa22.15■■□□□ 1.14
CCM2-201ENST00000258781 HILPDAQ9Y5L2 63 aa22.15■■□□□ 1.14
CCM2-201ENST00000258781 WNK2Q9Y3S1 2297 aa22.15■■□□□ 1.14
CCM2-201ENST00000258781 IGHV4-30-2A0A087WSY4 118 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 869 ms