RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TDGF1P3P51864 188 aa11.08□□□□□ -0.63
PRPF38A-201ENST00000257181 LRTM2Q8N967 370 aa11.08□□□□□ -0.63
PRPF38A-201ENST00000257181 RSG1Q9BU20 258 aa11.08□□□□□ -0.63
PRPF38A-201ENST00000257181 CBY1Q9Y3M2 126 aa11.08□□□□□ -0.63
PRPF38A-201ENST00000257181 GCGP01275 180 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 CACNG7P62955 275 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 OR2D3Q8NGH3 330 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 PRDM13Q9H4Q3 707 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 CABIN1Q9Y6J0 2220 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 GHRHP01286 108 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 CLLU1Q5K131 121 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 MBNL3Q9NUK0 354 aaKnown RBP11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 HSPB8Q9UJY1 196 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 RTN4RQ9BZR6 473 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 RPL13AP40429 203 aaKnown RBP11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 KIR2DL4Q99706 377 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 VPREB3Q9UKI3 123 aa11.08□□□□□ -0.64
PRPF38A-201ENST00000257181 DUTP33316 252 aaKnown RBP11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 IGHV2-5P01817 119 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 TGFBR1P36897 503 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 LOXL1Q08397 574 aaPredicted RBP11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 CIARTQ8N365 385 aaPredicted RBP11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 RAB24Q969Q5 203 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 SLC25A38Q96DW6 304 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 PROK2Q9HC23 129 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 PLSCR3Q9NRY6 295 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 TNFRSF18Q9Y5U5 241 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 TRGV2A0A075B6R0 118 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 A0A1W2PP11 408 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 TMEM89A2RUT3 159 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 CBY3A6NI87 242 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 FNDC10F2Z333 226 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 LY6G6FQ5SQ64 297 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 TRAV21A0A0B4J279 112 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 P2RY4P51582 365 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 C2orf83Q53S99 150 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 PSMG4Q5JS54 123 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 FOXB2Q5VYV0 432 aa11.07□□□□□ -0.64
PRPF38A-201ENST00000257181 PLAURQ03405 335 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 LINC00305Q7Z4B0 112 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 HAPLN4Q86UW8 402 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 OR11H4Q8NGC9 324 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 OR1N2Q8NGR9 330 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 RNF138Q8WVD3 245 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 RNF125Q96EQ8 232 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 AQP10Q96PS8 301 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 CKAP5Q14008 2032 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 PDGFAP04085 211 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 ASCL4Q6XD76 172 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 NEU1Q99519 415 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 VGLL1Q99990 258 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 IGHV2-70P01814 119 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 SIGLEC15Q6ZMC9 328 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 STPG2Q8N412 459 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 TWIST1Q15672 202 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 TCF24Q7RTU0 167 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 CYB561D1Q8N8Q1 229 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
PRPF38A-201ENST00000257181 C7orf66A4D0T2 115 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 FOSL1P15407 271 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 LMO1P25800 156 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 ATP6V0CP27449 155 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 SUMO1P63165 101 aaKnown RBP11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 BTN1A1Q13410 526 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 C1QL2Q7Z5L3 287 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 PNRC2Q9NPJ4 139 aaKnown RBP11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 LOC102723971A0A1B0GUV8 181 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 PAGE4O60829 102 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 HSPB1P04792 205 aaKnown RBP11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 LDLRAD3Q86YD5 345 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 PPP1R3EQ9H7J1 279 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 INSP01308 110 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 ADORA2A-AS1P86434 159 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 CD177Q8N6Q3 437 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 OR10C1Q96KK4 312 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 IL36RNQ9UBH0 155 aa11.05□□□□□ -0.64
PRPF38A-201ENST00000257181 ZNHIT1O43257 154 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 BCL2P10415 239 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 FGFBP3Q8TAT2 258 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 DPH3Q96FX2 82 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 SFTA3P0C7M3 94 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 TMEM249Q2WGJ8 235 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 ZNF324BQ6AW86 544 aaPredicted RBP11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 ZNF562Q6V9R5 426 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 LCNL1Q6ZST4 164 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 ZDBF2Q9HCK1 2354 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 J3KRW8 73 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 RMI2Q96E14 147 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 MIEN1Q9BRT3 115 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 C17orf98A8MV24 154 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 FCN1O00602 326 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 NDUFB8O95169 186 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 REG1AP05451 166 aa11.04□□□□□ -0.64
PRPF38A-201ENST00000257181 KIAA0141Q14154 515 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms